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CAZyme Information: jhhlp_006063-t41_1-p1

You are here: Home > Sequence: jhhlp_006063-t41_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lomentospora prolificans
Lineage Ascomycota; Sordariomycetes; ; Microascaceae; Lomentospora; Lomentospora prolificans
CAZyme ID jhhlp_006063-t41_1-p1
CAZy Family GH43|CBM91
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
723 NLAX01000701|CGC2 77979.44 4.2924
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_LprolificansJHH5317 8768 N/A 208 8560
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.1.99.18:13

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 146 694 1.9e-235 0.9872262773722628

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225186 BetA 3.38e-64 159 693 9 535
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000 PRK02106 2.08e-36 159 692 7 532
choline dehydrogenase; Validated
398739 GMC_oxred_C 2.90e-27 553 687 3 143
GMC oxidoreductase. This domain found associated with pfam00732.
366272 GMC_oxred_N 3.07e-18 238 459 23 217
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
215420 PLN02785 1.02e-12 153 692 51 577
Protein HOTHEAD

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.09e-254 148 694 239 785
3.66e-253 158 694 249 786
6.43e-253 158 695 277 814
2.02e-252 155 694 246 785
2.02e-248 149 694 235 783

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.96e-230 158 694 8 545
Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides],4QI5_A Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]
2.75e-229 158 693 230 765
Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A],4QI7_B Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A]
3.68e-227 158 694 230 767
Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]
1.64e-130 158 694 3 537
Chain A, Cellobiose dehydrogenase [Phanerodontia chrysosporium],1NAA_B Chain B, Cellobiose dehydrogenase [Phanerodontia chrysosporium]
1.91e-130 158 694 8 542
Chain A, cellobiose dehydrogenase [Phanerodontia chrysosporium],1KDG_B Chain B, cellobiose dehydrogenase [Phanerodontia chrysosporium]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.65e-127 158 694 235 769
Cellobiose dehydrogenase OS=Phanerodontia chrysosporium OX=2822231 GN=CDH-1 PE=1 SV=1
1.65e-27 158 692 5 531
Oxygen-dependent choline dehydrogenase OS=Vibrio vulnificus (strain YJ016) OX=196600 GN=betA PE=3 SV=1
5.24e-27 158 692 5 531
Oxygen-dependent choline dehydrogenase OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=betA PE=3 SV=1
8.96e-27 150 702 38 585
Choline dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Chdh PE=1 SV=1
4.25e-26 158 691 5 527
L-sorbose 1-dehydrogenase OS=Gluconobacter oxydans OX=442 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.009473 0.990483 CS pos: 23-24. Pr: 0.9468

TMHMM  Annotations      help

There is no transmembrane helices in jhhlp_006063-t41_1-p1.