logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: jhhlp_003700-t41_1-p1

You are here: Home > Sequence: jhhlp_003700-t41_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lomentospora prolificans
Lineage Ascomycota; Sordariomycetes; ; Microascaceae; Lomentospora; Lomentospora prolificans
CAZyme ID jhhlp_003700-t41_1-p1
CAZy Family CE8
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
431 NLAX01000010|CGC2 46009.16 4.7166
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_LprolificansJHH5317 8768 N/A 208 8560
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in jhhlp_003700-t41_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA12 35 428 7.9e-153 0.972568578553616

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225044 YliI 1.05e-22 5 426 14 392
Glucose/arabinose dehydrogenase, beta-propeller fold [Carbohydrate transport and metabolism].
380207 ScyE_fam 0.003 47 74 3 30
ScyD/ScyE family protein. This family includes ScyE, a protein involved in scytomenin biosynthesis and export, and its paralog ScyD. Some members of the family contain a C-terminal PEP-CTERM domain that predictions anchoring to the outer membrane.
271323 NHL_like_1 0.005 32 117 224 313
Uncharacterized NHL-repeat domain in bacterial proteins. This bacterial family of NHL-repeat domains is found in a variety of domain architectures. The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.81e-157 1 428 1 422
2.09e-148 11 428 7 427
5.78e-147 21 428 20 425
4.17e-139 11 428 9 424
4.17e-139 11 428 9 424

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.06e-110 37 431 12 403
Iodide structure of Trichoderma reesei Carbohydrate-Active Enzymes Family AA12 [Trichoderma reesei RUT C-30]
1.09e-110 37 431 13 404
Native structure of Trichoderma reesei Carbohydrate-Active Enzymes Family AA12 [Trichoderma reesei RUT C-30]
1.13e-110 37 431 14 405
Calcium structure of Trichoderma reesei Carbohydrate-Active Enzymes Family AA12 [Trichoderma reesei RUT C-30]
1.62e-78 38 428 17 408
Chain A, Extracellular PQQ-dependent sugar dehydrogenase [Coprinopsis cinerea],6JWF_A Chain A, Extracellular PQQ-dependent sugar dehydrogenase [Coprinopsis cinerea],6JWF_B Chain B, Extracellular PQQ-dependent sugar dehydrogenase [Coprinopsis cinerea]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.72e-15 31 426 67 439
L-sorbosone dehydrogenase OS=Gluconacetobacter liquefaciens OX=89584 PE=4 SV=1
2.23e-06 164 426 159 372
Uncharacterized protein BB_0024 OS=Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31) OX=224326 GN=BB_0024 PE=4 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000228 0.999771 CS pos: 23-24. Pr: 0.9788

TMHMM  Annotations      help

There is no transmembrane helices in jhhlp_003700-t41_1-p1.