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CAZyme Information: jhhlp_001204-t41_1-p1

You are here: Home > Sequence: jhhlp_001204-t41_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lomentospora prolificans
Lineage Ascomycota; Sordariomycetes; ; Microascaceae; Lomentospora; Lomentospora prolificans
CAZyme ID jhhlp_001204-t41_1-p1
CAZy Family AA7
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
505 NLAX01000004|CGC1 53598.38 4.5249
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_LprolificansJHH5317 8768 N/A 208 8560
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8:3 3.2.1.-:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 45 477 1.4e-160 0.9887133182844243

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
227807 XynC 3.14e-19 41 423 31 397
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
405300 Glyco_hydr_30_2 1.38e-16 46 262 4 232
O-Glycosyl hydrolase family 30.
396577 Glyco_hydro_59 1.51e-06 78 306 21 221
Glycosyl hydrolase family 59.
407314 Glyco_hydro_30C 9.11e-05 391 443 1 54
Glycosyl hydrolase family 30 beta sandwich domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
9.30e-193 43 479 32 473
3.64e-190 46 479 21 466
1.84e-181 43 479 32 458
1.79e-171 43 479 32 447
2.99e-139 46 460 29 456

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.99e-138 46 484 5 452
Chain A, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464],7O0E_G Chain G, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
3.77e-137 46 485 12 460
Chain AAA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
2.58e-100 41 476 19 468
Chain A, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612],6IUJ_B Chain B, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612]
1.54e-98 42 476 91 539
Crystal structure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris [Saccharomyces uvarum],6KRN_A Crystal structure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris in complex with aldotriuronic acid [Saccharomyces uvarum]
5.24e-91 41 434 20 409
Chain A, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612],6M5Z_B Chain B, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.56e-138 46 485 29 477
GH30 family xylanase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Xyn30A PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.001051 0.998908 CS pos: 18-19. Pr: 0.9670

TMHMM  Annotations      help

There is no transmembrane helices in jhhlp_001204-t41_1-p1.