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CAZyme Information: evm.model.AC2VRR_s00169g86-p1

You are here: Home > Sequence: evm.model.AC2VRR_s00169g86-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Albugo candida
Lineage Oomycota; NA; ; Albuginaceae; Albugo; Albugo candida
CAZyme ID evm.model.AC2VRR_s00169g86-p1
CAZy Family GH72
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
211 23259.54 7.1997
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Acandida2VRR 15896 911350 72 15824
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in evm.model.AC2VRR_s00169g86-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 9 204 2.5e-69 0.7795918367346939

CDD Domains      help

evm.model.AC2VRR_s00169g86-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.09e-156 1 211 1 211
1.17e-122 27 211 1 185
9.00e-70 10 199 71 262
5.15e-68 12 201 11 202
1.07e-66 12 201 75 266

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.50e-25 20 183 1 170
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

evm.model.AC2VRR_s00169g86-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000189 0.999780 CS pos: 19-20. Pr: 0.9798

TMHMM  Annotations      help

There is no transmembrane helices in evm.model.AC2VRR_s00169g86-p1.