logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: evm.model.AC2VRR_s00133g77-p1

You are here: Home > Sequence: evm.model.AC2VRR_s00133g77-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Albugo candida
Lineage Oomycota; NA; ; Albuginaceae; Albugo; Albugo candida
CAZyme ID evm.model.AC2VRR_s00133g77-p1
CAZy Family GH5
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
306 33538.82 7.0525
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Acandida2VRR 15896 911350 72 15824
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in evm.model.AC2VRR_s00133g77-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 25 267 7.4e-38 0.9102040816326531

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
237864 PRK14950 3.39e-07 209 294 370 454
DNA polymerase III subunits gamma and tau; Provisional
223021 PHA03247 1.71e-06 209 296 2903 2998
large tegument protein UL36; Provisional
223021 PHA03247 2.61e-05 207 291 2765 2846
large tegument protein UL36; Provisional
223039 PHA03307 2.70e-05 211 299 100 207
transcriptional regulator ICP4; Provisional
223021 PHA03247 4.27e-05 208 291 2843 2936
large tegument protein UL36; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.64e-77 1 257 1 248
1.39e-41 21 212 10 201
1.08e-40 21 212 10 201
4.21e-40 21 212 10 201
5.92e-40 21 207 10 196

PDB Hits      help

evm.model.AC2VRR_s00133g77-p1 has no PDB hit.

Swiss-Prot Hits      help

evm.model.AC2VRR_s00133g77-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.018722 0.981243 CS pos: 32-33. Pr: 0.9281

TMHMM  Annotations      help

There is no transmembrane helices in evm.model.AC2VRR_s00133g77-p1.