logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: ZTRI_5.752.mRNA-p1

You are here: Home > Sequence: ZTRI_5.752.mRNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Zymoseptoria tritici
Lineage Ascomycota; Dothideomycetes; ; Mycosphaerellaceae; Zymoseptoria; Zymoseptoria tritici
CAZyme ID ZTRI_5.752.mRNA-p1
CAZy Family GH72
CAZyme Description similar to pectate lyase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
342 37372.85 6.7330
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_ZtriticiIPO323 11839 336722 13 11826
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in ZTRI_5.752.mRNA-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 82 257 9.2e-109 0.9943181818181818

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
214765 Amb_all 3.78e-59 82 256 9 186
Amb_all domain.
226384 PelB 9.60e-54 53 339 57 344
Pectate lyase [Carbohydrate transport and metabolism].
366158 Pec_lyase_C 1.33e-40 87 256 32 211
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.25e-237 1 342 1 342
9.14e-237 1 342 1 342
1.84e-236 1 342 1 342
4.45e-228 1 341 1 341
7.67e-156 7 341 10 347

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.15e-33 34 339 5 325
Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5]
2.50e-22 87 238 130 313
Structure of the thermostable pectate lyase PL 47 [Bacillus sp. TS-47]
8.88e-19 89 234 127 296
Structural insights into the loss of catalytic competence in pectate lyase at low pH [Bacillus subtilis],5X2I_A Polygalacturonate Lyase by Fusing with a Self-assembling Amphipathic Peptide [Bacillus subtilis subsp. subtilis str. 168]
1.01e-18 89 234 148 317
Bacillus Subtilis Pectate Lyase [Bacillus subtilis]
1.14e-18 38 233 11 246
Chain A, PECTATE LYASE E [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.50e-46 55 335 57 316
Probable pectate lyase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyA PE=3 SV=1
5.50e-46 55 335 57 316
Probable pectate lyase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyA PE=3 SV=1
1.02e-43 36 335 43 322
Pectate lyase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyA PE=1 SV=1
2.44e-43 64 335 66 316
Probable pectate lyase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyA PE=3 SV=1
2.44e-43 64 335 66 316
Probable pectate lyase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000340 0.999630 CS pos: 23-24. Pr: 0.9468

TMHMM  Annotations      help

There is no transmembrane helices in ZTRI_5.752.mRNA-p1.