CAZyme Information: ZTRI_3.873.mRNA-p1

Basic Information

• Species: Zymoseptoria tritici
• Lineage: Ascomycota; Dothideomycetes; ; Mycosphaerellaceae; Zymoseptoria; Zymoseptoria tritici
• CAZyme ID: ZTRI_3.873.mRNA-p1
• CAZy Family: GH38
• CAZyme Description: similar to glucose-methanol-choline (gmc) oxidoreductase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
640	Ztri_chr_3|CGC18	70057.39	8.6657

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_ZtriticiIPO323	11839	336722	13	11826

• Gene Location: location=Ztri_chr_3:2740545-2742631(+)

Full Sequence      

MVLRTLGWLTLGLLRLVAASHGAHSEAATQYEYIVVGSGAGGGTLASRLAREGHSTLLIE
AGDDQSSNDNTTIPLFQSLVTGDPEIQWDFFVNHYQDQSRAARDPKYTKGKGCLYPRAQI
VGGCVTHNALIFIRAHDSDWDGIARITGDSSWSARNMDKYLDKVYEWQPVNPTDPSILVR
DTQLVRHLVAGAAVISPSLFRSIIPQGLSSLLGLDRLNPIVEISNALLGDANARTRNRDS
TTGLYPIPLTAEGGARKSIREHIKDTIAQGYPLTLKTNTFVTKVLFDESGNQLRACGVEY
LEGKHLYRASPKSGGKGTPGSVRATKEVILAGGTFNTVQLLKLSGIGPKKELESFKIPVK
VNLPGVGRNMQDRYEIGLNVQHEKDFSITDGCRLDAKPHDKCYKQWKQNPNILAQRGAYA
SNGLAATMIGHSDYADNSDVDLWMFSSPSNFRGYFPQWYDTLLAQHNWFSWYTLKAHTRN
TAGTVKLRSADPLDVPQIDFNYFDTGTTANGAADKDLASMVKALRTCRKALAKYNDDVIA
RLLPGSKFVEKEPGPHVQSDEDLGQYIKDRAWGHHACGTTKIGADGDKMAVLDSKFRVRG
VKALRIADAGVFPKIPGVFITAPIFVMAEKAADTILHGGD

Enzyme Prediction     

No EC number prediction in ZTRI_3.873.mRNA-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
AA3	30	636	4.3e-100	0.9929577464788732

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
235000	PRK02106	3.81e-65	27	636	2	532	choline dehydrogenase; Validated
225186	BetA	9.84e-62	24	636	1	534	Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
398739	GMC_oxred_C	1.94e-36	483	631	5	143	GMC oxidoreductase. This domain found associated with pfam00732.
215420	PLN02785	7.34e-17	20	627	45	568	Protein HOTHEAD
366272	GMC_oxred_N	3.40e-14	108	375	14	218	GMC oxidoreductase. This family of proteins bind FAD as a cofactor.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
SMR49022.1|AA3	0.0	1	640	1	640
SMQ49199.1|AA3	0.0	1	640	1	640
SMR50199.1|AA3	0.0	1	640	1	640
SMY22899.1|AA3	0.0	16	640	65	689
SMR51166.1|AA3	6.19e-315	42	638	42	636

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6ZH7_A	2.71e-36	25	632	2	557	Chain A, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
4UDP_A	3.99e-36	29	636	4	528	Crystal structure of 5-hydroxymethylfurfural oxidase (HMFO) in the oxidized state [Methylovorus sp. MP688],4UDP_B Crystal structure of 5-hydroxymethylfurfural oxidase (HMFO) in the oxidized state [Methylovorus sp. MP688],4UDQ_A Crystal structure of 5-hydroxymethylfurfural oxidase (HMFO) in the reduced state [Methylovorus sp. MP688],4UDQ_B Crystal structure of 5-hydroxymethylfurfural oxidase (HMFO) in the reduced state [Methylovorus sp. MP688]
6F97_A	3.99e-36	29	636	4	528	Crystal structure of the V465T mutant of 5-(Hydroxymethyl)furfural Oxidase (HMFO) [Methylovorus sp. MP688],6F97_B Crystal structure of the V465T mutant of 5-(Hydroxymethyl)furfural Oxidase (HMFO) [Methylovorus sp. MP688]
6YS1_AAA	9.04e-36	27	632	4	557	Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
6YRU_AAA	9.04e-36	27	632	4	557	Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q7MF12|BETA_VIBVY	8.54e-48	31	637	5	532	Oxygen-dependent choline dehydrogenase OS=Vibrio vulnificus (strain YJ016) OX=196600 GN=betA PE=3 SV=1
sp|Q8D3K2|BETA_VIBVU	1.08e-46	31	637	5	532	Oxygen-dependent choline dehydrogenase OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=betA PE=3 SV=1
sp|Q8CMY2|BETA_STAES	1.06e-44	31	635	8	538	Oxygen-dependent choline dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=betA PE=3 SV=1
sp|Q5HL11|BETA_STAEQ	1.45e-44	31	635	8	538	Oxygen-dependent choline dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=betA PE=3 SV=1
sp|Q8NUM0|BETA_STAAW	1.24e-43	31	635	8	536	Oxygen-dependent choline dehydrogenase OS=Staphylococcus aureus (strain MW2) OX=196620 GN=betA PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.154576	0.845394	CS pos: 24-25. Pr: 0.4281

TMHMM  Annotations     

There is no transmembrane helices in ZTRI_3.873.mRNA-p1.