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CAZyme Information: ZTRI_3.153.mRNA-p1

You are here: Home > Sequence: ZTRI_3.153.mRNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Zymoseptoria tritici
Lineage Ascomycota; Dothideomycetes; ; Mycosphaerellaceae; Zymoseptoria; Zymoseptoria tritici
CAZyme ID ZTRI_3.153.mRNA-p1
CAZy Family GH3
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2093 Ztri_chr_3|CGC12 228466.54 5.4030
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_ZtriticiIPO323 11839 336722 13 11826
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.28:5 -

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH65 1459 1824 2.7e-73 0.9838709677419355

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
235432 PRK05367 0.0 74 1046 8 954
aminomethyl-transferring glycine dehydrogenase.
171585 PRK12566 0.0 72 1044 9 952
glycine dehydrogenase; Provisional
223935 GcvP2 0.0 545 1018 15 496
Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism].
223480 GcvP1 0.0 70 529 1 445
Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism].
396772 GDC-P 0.0 78 528 1 428
Glycine cleavage system P-protein. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalyzed by this protein is:- Glycine + lipoylprotein <=> S-aminomethyldihydrolipoylprotein + CO2

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1083 2093 13 1023
0.0 1087 2093 1 1007
0.0 1087 2093 1 1007
0.0 1087 2093 1 1007
0.0 1090 2087 6 1003

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
0.0 70 1047 27 982
Crystal Structure of Glycine Decarboxylase P-protein from Synechocystis sp. PCC 6803, apo form [Synechocystis sp. PCC 6803 substr. Kazusa],4LGL_B Crystal Structure of Glycine Decarboxylase P-protein from Synechocystis sp. PCC 6803, apo form [Synechocystis sp. PCC 6803 substr. Kazusa]
0.0 70 1047 27 982
Crystal structure of Synechocystis sp. PCC 6803 glycine decarboxylase (P-protein), holo form with pyridoxal-5'-phosphate and glycine [Synechocystis sp. PCC 6803 substr. Kazusa],4LHC_B Crystal structure of Synechocystis sp. PCC 6803 glycine decarboxylase (P-protein), holo form with pyridoxal-5'-phosphate and glycine [Synechocystis sp. PCC 6803 substr. Kazusa],4LHD_A Crystal structure of Synechocystis sp. PCC 6803 glycine decarboxylase (P-protein), holo form with pyridoxal-5'-phosphate and glycine, closed flexible loop [Synechocystis sp. PCC 6803 substr. Kazusa],4LHD_B Crystal structure of Synechocystis sp. PCC 6803 glycine decarboxylase (P-protein), holo form with pyridoxal-5'-phosphate and glycine, closed flexible loop [Synechocystis sp. PCC 6803 substr. Kazusa]
0.0 74 1046 18 966
Crystal structure of human glycine decarboxylase (P-protein) [Homo sapiens],6I33_B Crystal structure of human glycine decarboxylase (P-protein) [Homo sapiens],6I35_A Crystal structure of human glycine decarboxylase (P-protein) bound with pyridoxyl-glycine-5'-monophosphate [Homo sapiens],6I35_B Crystal structure of human glycine decarboxylase (P-protein) bound with pyridoxyl-glycine-5'-monophosphate [Homo sapiens],6I35_C Crystal structure of human glycine decarboxylase (P-protein) bound with pyridoxyl-glycine-5'-monophosphate [Homo sapiens],6I35_D Crystal structure of human glycine decarboxylase (P-protein) bound with pyridoxyl-glycine-5'-monophosphate [Homo sapiens]
0.0 74 1046 18 966
Crystal structure of Neanderthal glycine decarboxylase (P-protein) [Homo sapiens neanderthalensis],6I34_B Crystal structure of Neanderthal glycine decarboxylase (P-protein) [Homo sapiens neanderthalensis],6I34_C Crystal structure of Neanderthal glycine decarboxylase (P-protein) [Homo sapiens neanderthalensis],6I34_D Crystal structure of Neanderthal glycine decarboxylase (P-protein) [Homo sapiens neanderthalensis]
1.71e-77 570 961 47 434
Crystal structure of glycine decarboxylase (P-protein) of the glycine cleavage system, in apo form [Thermus thermophilus HB8],1WYT_D Crystal structure of glycine decarboxylase (P-protein) of the glycine cleavage system, in apo form [Thermus thermophilus HB8],1WYU_B Crystal structure of glycine decarboxylase (P-protein) of the glycine cleavage system, in holo form [Thermus thermophilus HB8],1WYU_D Crystal structure of glycine decarboxylase (P-protein) of the glycine cleavage system, in holo form [Thermus thermophilus HB8],1WYU_F Crystal structure of glycine decarboxylase (P-protein) of the glycine cleavage system, in holo form [Thermus thermophilus HB8],1WYU_H Crystal structure of glycine decarboxylase (P-protein) of the glycine cleavage system, in holo form [Thermus thermophilus HB8],1WYV_B Crystal structure of glycine decarboxylase (P-protein) of the glycine cleavage system, in inhibitor-bound form [Thermus thermophilus HB8],1WYV_D Crystal structure of glycine decarboxylase (P-protein) of the glycine cleavage system, in inhibitor-bound form [Thermus thermophilus HB8],1WYV_F Crystal structure of glycine decarboxylase (P-protein) of the glycine cleavage system, in inhibitor-bound form [Thermus thermophilus HB8],1WYV_H Crystal structure of glycine decarboxylase (P-protein) of the glycine cleavage system, in inhibitor-bound form [Thermus thermophilus HB8]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
0.0 76 1047 13 953
Glycine dehydrogenase (decarboxylating) OS=Pseudomonas syringae pv. syringae (strain B728a) OX=205918 GN=gcvP PE=3 SV=1
0.0 76 1044 16 955
Glycine dehydrogenase (decarboxylating) OS=Photobacterium profundum (strain SS9) OX=298386 GN=gcvP PE=3 SV=1
0.0 76 1047 14 955
Glycine dehydrogenase (decarboxylating) OS=Aliivibrio fischeri (strain ATCC 700601 / ES114) OX=312309 GN=gcvP PE=3 SV=1
0.0 68 1046 26 994
Glycine dehydrogenase (decarboxylating), mitochondrial OS=Dictyostelium discoideum OX=44689 GN=gcvP PE=3 SV=1
0.0 70 1046 6 957
Glycine dehydrogenase (decarboxylating) OS=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIMB 9529 / HD100) OX=264462 GN=gcvP PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000050 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in ZTRI_3.153.mRNA-p1.