CAZyme Information: ZTRI_12.113.mRNA-p1

Basic Information

• Species: Zymoseptoria tritici
• Lineage: Ascomycota; Dothideomycetes; ; Mycosphaerellaceae; Zymoseptoria; Zymoseptoria tritici
• CAZyme ID: ZTRI_12.113.mRNA-p1
• CAZy Family: GH13
• CAZyme Description: similar to DUF1680 domain protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
702	Ztri_chr_12|CGC4	78800.29	7.1285

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_ZtriticiIPO323	11839	336722	13	11826

• Gene Location: location=Ztri_chr_12:378917-381183(-)

Full Sequence      

MSTMHLARPSGEMADLRIDSDSPTHRANPQESFAETTVDADSFYGRLRKLYADKVLKTQL
DQLRKQGSYYAFNLKWNPKYELGRLHGGKSSITGGNVCLFWDSDVAKWIEAACYFLSSTE
GKESVHREEYESAIEELIGMMEKAQGSDGYLGTYFTVVDRKGRLQNLRDMHELYCCGHLL
EAALAHHQYSRSTKFLNIMIRYVRLLMKSFGPKSNQKHGYPGHPELELAMVRLYHRTRDP
EHLAFARYLVGTRGVIEPDLGNRAYFVWEAEQRQDPFYYRTMDTITDGRYAQWHAPLKEQ
KTILGHAVRAMYLVTAAADLGDDFLDSARRLWNDTVDNKMYPTGGIGSDDRIEGFSERPH
FLPDTEIEGGYAETCASIGLCMLGERLLSHNLDGRVRDVLERSLLNTSLGGGSLDGNRFF
YANPLASAPGGDTKRSEWFDCCCCPPNLCRTIGLLGGYTWSTQITATTIDLNIYLYLSAT
RRIQLPDSGSSEAIVRATSEMPWNGKTVLDFSAPAHWRWVVHLPVPGYAKKFRMNGIALA
GEPTNGFHTVHLPATSKIIIEFDMPVMLESPHPATQQDTLTVLRGPLVYTAESWDNASLL
QHARGFHNVGLPEKATFEAVPISIGGHEMISLVTHDARMLASREGADDIGSTKIVTGQPG
ARARTWMSARQPLRLIPFFARCNRKNSQQLRTSFTRVADGDI

Enzyme Prediction     

EC	3.2.1.185:2

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH127	41	589	1.1e-131	0.9885496183206107

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
226063	COG3533	3.62e-113	29	684	5	576	Uncharacterized conserved protein, DUF1680 family [Function unknown].
400342	Glyco_hydro_127	4.62e-96	41	589	6	502	Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
SMQ55631.1|GH127	0.0	13	702	1	690
SMR60826.1|GH127	0.0	13	702	1	690
SMR63966.1|GH127	0.0	13	702	1	690
SMY29319.1|GH127	0.0	13	702	1	690
QKX55142.1|GH127	1.48e-137	29	693	4	670

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4QJY_A	1.32e-89	99	690	73	642	Crystal structure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QJY_B Crystal structure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
4QK0_A	1.58e-84	99	684	73	636	Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_B Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_C Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_D Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
3WRE_A	1.13e-69	99	685	72	648	The crystal structure of native HypBA1 from Bifidobacterium longum JCM 1217 [Bifidobacterium longum subsp. longum JCM 1217],3WRG_A The complex structure of HypBA1 with L-arabinose [Bifidobacterium longum subsp. longum JCM 1217]
3WKW_A	1.40e-69	99	685	72	648	Crystal structure of GH127 beta-L-arabinofuranosidase HypBA1 from Bifidobacterium longum ligand free form [Bifidobacterium longum subsp. longum JCM 1217],3WKX_A Crystal structure of GH127 beta-L-arabinofuranosidase HypBA1 from Bifidobacterium longum arabinose complex form [Bifidobacterium longum subsp. longum JCM 1217],7BZL_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217],7DIF_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217],7EXV_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217],7EXW_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217]
7EXU_A	3.72e-69	99	685	72	648	Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|E8MGH8|HYBA1_BIFL2	5.82e-69	99	685	72	648	Non-reducing end beta-L-arabinofuranosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA1 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000080	0.000000

TMHMM  Annotations     

There is no transmembrane helices in ZTRI_12.113.mRNA-p1.