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CAZyme Information: Z517_10133-t43_1-p1

You are here: Home > Sequence: Z517_10133-t43_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fonsecaea pedrosoi
Lineage Ascomycota; Eurotiomycetes; ; Herpotrichiellaceae; Fonsecaea; Fonsecaea pedrosoi
CAZyme ID Z517_10133-t43_1-p1
CAZy Family GT2
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
475 51375.49 5.5750
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_FpedrosoiCBS271-37 12573 1442368 46 12527
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in Z517_10133-t43_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 93 463 7.2e-55 0.9692307692307692

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
177865 PLN02218 1.16e-24 80 461 77 418
polygalacturonase ADPG
178580 PLN03003 3.42e-16 156 469 106 388
Probable polygalacturonase At3g15720
395231 Glyco_hydro_28 4.16e-16 158 458 48 319
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
215426 PLN02793 4.21e-16 161 445 143 394
Probable polygalacturonase
215120 PLN02188 1.65e-14 82 462 48 391
polygalacturonase/glycoside hydrolase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.11e-189 36 474 32 462
3.45e-188 30 474 26 462
1.03e-184 36 474 32 461
5.57e-176 116 462 1 346
9.90e-109 74 471 32 438

PDB Hits      help

Z517_10133-t43_1-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.76e-109 74 471 32 438
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rgxA PE=2 SV=2
3.51e-109 74 471 32 438
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger OX=5061 GN=rgxA PE=2 SV=1
1.53e-107 74 471 31 437
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rgxA PE=3 SV=1
1.53e-107 74 471 31 437
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rgxA PE=3 SV=2
1.44e-60 74 445 30 395
Putative galacturan 1,4-alpha-galacturonidase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rgxC PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000544 0.999459 CS pos: 20-21. Pr: 0.9768

TMHMM  Annotations      help

There is no transmembrane helices in Z517_10133-t43_1-p1.