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CAZyme Information: Z517_09677-t43_1-p1

You are here: Home > Sequence: Z517_09677-t43_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fonsecaea pedrosoi
Lineage Ascomycota; Eurotiomycetes; ; Herpotrichiellaceae; Fonsecaea; Fonsecaea pedrosoi
CAZyme ID Z517_09677-t43_1-p1
CAZy Family GT15
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
478 52135.26 5.1154
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_FpedrosoiCBS271-37 12573 1442368 46 12527
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in Z517_09677-t43_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 65 410 1.8e-65 0.9230769230769231

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
177865 PLN02218 5.48e-34 115 393 152 414
polygalacturonase ADPG
215426 PLN02793 1.55e-33 114 391 138 398
Probable polygalacturonase
395231 Glyco_hydro_28 3.47e-33 115 388 47 304
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
215120 PLN02188 1.35e-31 42 387 51 374
polygalacturonase/glycoside hydrolase family protein
178580 PLN03003 5.13e-28 127 396 119 366
Probable polygalacturonase At3g15720

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.82e-150 7 431 6 430
7.09e-143 19 439 16 435
7.09e-143 19 439 16 435
7.09e-143 19 439 16 435
7.09e-143 19 439 16 435

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.73e-31 42 421 30 388
Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis]
2.30e-16 118 360 68 304
Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides]
8.13e-13 118 400 75 339
Chain A, endo-polygalacturonase [Evansstolkia leycettana]
1.09e-12 118 400 75 339
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
4.40e-12 118 400 67 331
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.19e-71 6 426 10 422
Alpha-L-rhamnosidase rgxB OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rgxB PE=2 SV=2
3.15e-60 7 425 12 437
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger OX=5061 GN=rgxA PE=2 SV=1
3.15e-60 10 425 15 437
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rgxA PE=2 SV=2
4.00e-54 24 399 28 424
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rgxA PE=3 SV=1
4.00e-54 24 399 28 424
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rgxA PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000365 0.999605 CS pos: 18-19. Pr: 0.9493

TMHMM  Annotations      help

There is no transmembrane helices in Z517_09677-t43_1-p1.