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CAZyme Information: YJR153W-t26_1-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Saccharomyces cerevisiae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Saccharomycetes; ; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae | |||||||||||
| CAZyme ID | YJR153W-t26_1-p1 | |||||||||||
| CAZy Family | GT15 | |||||||||||
| CAZyme Description | Pgu1p | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:8 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 40 | 346 | 3.4e-68 | 0.9323076923076923 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 1.49e-124 | 43 | 361 | 1 | 321 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 227721 | Pgu1 | 3.02e-62 | 4 | 357 | 72 | 520 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| 177865 | PLN02218 | 2.08e-26 | 41 | 339 | 93 | 401 | polygalacturonase ADPG |
| 178580 | PLN03003 | 2.69e-23 | 102 | 319 | 120 | 333 | Probable polygalacturonase At3g15720 |
| 215426 | PLN02793 | 6.73e-20 | 102 | 326 | 150 | 376 | Probable polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.92e-254 | 1 | 361 | 1 | 361 | |
| 2.92e-254 | 1 | 361 | 1 | 361 | |
| 2.92e-254 | 1 | 361 | 1 | 361 | |
| 2.92e-254 | 1 | 361 | 1 | 361 | |
| 2.92e-254 | 1 | 361 | 1 | 361 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.12e-120 | 26 | 361 | 2 | 339 | Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini] |
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| 2.99e-119 | 19 | 356 | 3 | 341 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 2.99e-119 | 19 | 356 | 3 | 341 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 4.92e-116 | 26 | 356 | 2 | 333 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.86e-109 | 15 | 355 | 18 | 358 | Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger],1CZF_B Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5.18e-255 | 1 | 361 | 1 | 361 | Polygalacturonase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PGU1 PE=1 SV=1 |
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| 3.59e-119 | 12 | 361 | 11 | 363 | Endopolygalacturonase 1 OS=Colletotrichum lindemuthianum OX=290576 GN=PG1 PE=3 SV=1 |
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| 5.25e-119 | 21 | 361 | 24 | 364 | Polygalacturonase OS=Cochliobolus carbonum OX=5017 GN=PGN1 PE=3 SV=1 |
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| 2.55e-117 | 21 | 361 | 33 | 376 | Polygalacturonase OS=Penicillium griseoroseum OX=84562 GN=PGG1 PE=3 SV=1 |
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| 5.19e-114 | 12 | 361 | 17 | 364 | Endopolygalacturonase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgaB PE=1 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000258 | 0.999706 | CS pos: 24-25. Pr: 0.9733 |