logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: YALI0_C01411g-t26_1-p1

You are here: Home > Sequence: YALI0_C01411g-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Yarrowia lipolytica
Lineage Ascomycota; Saccharomycetes; ; Dipodascaceae; Yarrowia; Yarrowia lipolytica
CAZyme ID YALI0_C01411g-t26_1-p1
CAZy Family GH17
CAZyme Description YALI0C01411p
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1914 CR382129|CGC10 220367.48 7.4856
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_YlipolyticaCLIB122 7223 284591 775 6448
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.34:56

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT48 841 1644 7e-299 0.986468200270636

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
396784 Glucan_synthase 0.0 840 1684 1 819
1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1).
405046 FKS1_dom1 2.88e-37 330 438 1 111
1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 1914 7 1920
0.0 1 1914 1 1914
0.0 1 1914 1 1914
0.0 121 1896 162 1913
0.0 186 1875 191 1858

PDB Hits      help

YALI0_C01411g-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
0.0 103 1896 17 1862
1,3-beta-glucan synthase component GSC2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=GSC2 PE=1 SV=2
0.0 186 1897 179 1865
1,3-beta-glucan synthase component FKS1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=fksA PE=3 SV=1
0.0 199 1896 24 1755
1,3-beta-glucan synthase component FKS3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=FKS3 PE=1 SV=1
0.0 186 1897 146 1844
1,3-beta-glucan synthase component FKS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=FKS1 PE=1 SV=2
0.0 199 1888 146 1795
1,3-beta-glucan synthase component FKS1 OS=Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) OX=235443 GN=FKS1 PE=3 SV=3

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000081 0.000004

TMHMM  Annotations      download full data without filtering help

Start End
485 504
525 547
562 584
591 613
653 675
706 728
1357 1379
1413 1430
1496 1518
1525 1544
1615 1637
1663 1685
1695 1717
1724 1746
1797 1816
1852 1874