You are browsing environment: FUNGIDB
CAZyme Information: XP_003437378.1
You are here: Home > Sequence: XP_003437378.1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Podospora anserina | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Sordariomycetes; ; Podosporaceae; Podospora; Podospora anserina | |||||||||||
| CAZyme ID | XP_003437378.1 | |||||||||||
| CAZy Family | GT4 | |||||||||||
| CAZyme Description | Amb_all domain-containing protein [Source:UniProtKB/TrEMBL;Acc:B2ANP1] | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 81 | 183 | 3.3e-41 | 0.5580110497237569 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 226384 | PelB | 5.73e-41 | 33 | 292 | 29 | 341 | Pectate lyase [Carbohydrate transport and metabolism]. |
| 214765 | Amb_all | 3.64e-40 | 87 | 231 | 8 | 189 | Amb_all domain. |
| 366158 | Pec_lyase_C | 2.75e-19 | 89 | 228 | 28 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 8.08e-307 | 1 | 584 | 1 | 584 | |
| 8.08e-307 | 1 | 584 | 1 | 584 | |
| 2.13e-260 | 1 | 584 | 1 | 617 | |
| 9.37e-93 | 31 | 294 | 33 | 329 | |
| 9.37e-93 | 31 | 294 | 33 | 329 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.93e-23 | 40 | 291 | 6 | 321 | Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5] |
|
| 9.21e-14 | 31 | 275 | 1 | 334 | Chain A, PECTATE LYASE E [Dickeya chrysanthemi] |
|
| 6.98e-12 | 98 | 272 | 92 | 303 | Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O88_A Chain A, Pectate Lyase C [Dickeya chrysanthemi],1O8D_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8E_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8F_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8G_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8H_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8I_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8J_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8K_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8L_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8M_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1PLU_A Chain A, Protein (pectate Lyase C) [Dickeya chrysanthemi],2PEC_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi] |
|
| 6.98e-12 | 98 | 272 | 92 | 303 | Chain A, Pectate lyase C [Dickeya chrysanthemi] |
|
| 5.16e-10 | 91 | 228 | 128 | 330 | Structure of the thermostable pectate lyase PL 47 [Bacillus sp. TS-47] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.15e-55 | 1 | 294 | 1 | 326 | Pectate lyase plyB OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyB PE=1 SV=1 |
|
| 4.40e-53 | 1 | 294 | 1 | 326 | Probable pectate lyase B OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyB PE=3 SV=1 |
|
| 4.40e-53 | 1 | 294 | 1 | 326 | Probable pectate lyase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyB PE=3 SV=1 |
|
| 5.97e-53 | 1 | 294 | 1 | 325 | Probable pectate lyase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyB PE=3 SV=1 |
|
| 2.71e-50 | 19 | 294 | 24 | 329 | Pectate lyase B OS=Colletotrichum gloeosporioides OX=474922 GN=PLB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000377 | 0.999596 | CS pos: 24-25. Pr: 0.9442 |