logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: XP_001908770.1

You are here: Home > Sequence: XP_001908770.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Podospora anserina
Lineage Ascomycota; Sordariomycetes; ; Podosporaceae; Podospora; Podospora anserina
CAZyme ID XP_001908770.1
CAZy Family GH30
CAZyme Description Cellulase [Source:UniProtKB/TrEMBL;Acc:B2AYG9]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
245 25844.84 7.2680
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PanserinaSmat 10888 515849 370 10518
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in XP_001908770.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH45 23 223 3.8e-90 0.98989898989899

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
280233 Glyco_hydro_45 2.44e-80 22 223 1 213
Glycosyl hydrolase family 45.
409008 DPBB_EXP_N-like 0.005 63 143 5 92
N-terminal double-psi beta-barrel fold domain of the expansin family and similar domains. The plant expansin family consists of four subfamilies, alpha-expansin (EXPA), beta-expansin (EXPB), expansin-like A (EXLA), and expansin-like B (EXLB). EXPA and EXPB display cell wall loosening activity and are involved in cell expansion and other developmental events during which cell wall modification occurs. EXPA proteins function more efficiently on dicotyledonous cell walls, whereas EXPB proteins exhibit specificity for the cell walls of monocotyledons. Expansins also affect environmental stress responses. Expansin family proteins contain an N-terminal domain (D1) homologous to the catalytic domain of glycoside hydrolase family 45 (GH45) proteins but with no hydrolytic activity, and a C-terminal domain (D2) homologous to group-2 grass pollen allergens. This family also includes GH45 endoglucanases from mollusks. This model represents the N-terminal domain of expansins and similar proteins, which adopts a double-psi beta-barrel (DPBB) fold.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.01e-189 1 245 1 245
2.01e-189 1 245 1 245
9.55e-188 1 245 1 245
3.07e-160 13 245 17 249
3.59e-152 17 245 1 229

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.27e-99 16 228 1 208
Crystal structure of a glycoside hydrolase from Thielavia terrestris NRRL 8126 [Thermothielavioides terrestris NRRL 8126]
5.88e-99 15 228 18 226
Apo Cel45A from Neurospora crassa OR74A [Neurospora crassa OR74A],6MVJ_A Cellobiose complex Cel45A from Neurospora crassa OR74A [Neurospora crassa OR74A]
1.31e-98 19 228 1 205
Crystal structure of a glycoside hydrolase in complex with cellotetrose from Thielavia terrestris NRRL 8126 [Thermothielavioides terrestris NRRL 8126],5GM9_A Crystal structure of a glycoside hydrolase in complex with cellobiose [Thermothielavioides terrestris NRRL 8126]
2.50e-96 23 228 3 204
Endoglucanase from Humicola insolens AT 1.7A resolution [Humicola insolens]
5.28e-95 23 228 3 204
Endoglucanase V [Humicola insolens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.34e-99 6 228 5 224
Putative endoglucanase type K OS=Fusarium oxysporum OX=5507 PE=2 SV=1
3.01e-94 23 228 3 204
Endoglucanase-5 OS=Humicola insolens OX=34413 PE=1 SV=1
5.71e-90 21 225 20 221
Endoglucanase OS=Cryptopygus antarcticus OX=187623 PE=1 SV=1
1.41e-56 18 223 35 240
Endoglucanase OS=Phaedon cochleariae OX=80249 PE=2 SV=1
8.23e-43 23 221 269 496
Endoglucanase B OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=celB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000225 0.999770 CS pos: 16-17. Pr: 0.9784

TMHMM  Annotations      help

There is no transmembrane helices in XP_001908770.1.