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CAZyme Information: XP_001906825.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Podospora anserina | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Sordariomycetes; ; Podosporaceae; Podospora; Podospora anserina | |||||||||||
| CAZyme ID | XP_001906825.1 | |||||||||||
| CAZy Family | GH132 | |||||||||||
| CAZyme Description | Amb_all domain-containing protein [Source:UniProtKB/TrEMBL;Acc:B2ASX3] | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 4.2.2.2:30 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 138 | 285 | 1.1e-31 | 0.850828729281768 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 226384 | PelB | 5.04e-27 | 56 | 351 | 46 | 340 | Pectate lyase [Carbohydrate transport and metabolism]. |
| 214765 | Amb_all | 2.85e-24 | 138 | 285 | 28 | 186 | Amb_all domain. |
| 366158 | Pec_lyase_C | 3.08e-18 | 99 | 285 | 29 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
| 404168 | Beta_helix | 0.005 | 140 | 305 | 1 | 153 | Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.07e-258 | 1 | 360 | 1 | 360 | |
| 2.07e-258 | 1 | 360 | 1 | 360 | |
| 1.95e-230 | 1 | 360 | 1 | 337 | |
| 4.14e-43 | 41 | 356 | 25 | 322 | |
| 4.14e-43 | 41 | 356 | 25 | 322 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.47e-10 | 49 | 279 | 7 | 226 | Catalytic function and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima] |
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| 4.36e-07 | 149 | 286 | 129 | 272 | VexL: A periplasmic depolymerase provides new insight into ABC transporter-dependent secretion of bacterial capsular polysaccharides [Achromobacter denitrificans] |
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| 3.83e-06 | 149 | 288 | 132 | 279 | Pectin Lyase B [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.08e-38 | 33 | 356 | 28 | 327 | Pectate lyase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyA PE=1 SV=1 |
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| 2.85e-36 | 39 | 356 | 30 | 323 | Pectate lyase A OS=Aspergillus niger OX=5061 GN=plyA PE=1 SV=1 |
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| 3.98e-36 | 39 | 356 | 30 | 323 | Probable pectate lyase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=plyA PE=3 SV=1 |
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| 5.66e-33 | 44 | 356 | 33 | 321 | Probable pectate lyase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyA PE=3 SV=1 |
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| 5.66e-33 | 44 | 356 | 33 | 321 | Probable pectate lyase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.601877 | 0.398120 |