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CAZyme Information: XP_001904868.1

You are here: Home > Sequence: XP_001904868.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Podospora anserina
Lineage Ascomycota; Sordariomycetes; ; Podosporaceae; Podospora; Podospora anserina
CAZyme ID XP_001904868.1
CAZy Family AA9
CAZyme Description Glyco_hydr_30_2 domain-containing protein [Source:UniProtKB/TrEMBL;Acc:B2ALC8]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
487 54355.97 7.5654
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PanserinaSmat 10888 515849 370 10518
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in XP_001904868.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 26 480 3.2e-147 0.9956140350877193

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
405300 Glyco_hydr_30_2 5.08e-11 27 230 6 195
O-Glycosyl hydrolase family 30.
227807 XynC 2.21e-07 129 480 93 426
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 487 1 487
0.0 1 487 1 487
0.0 1 487 1 487
8.20e-251 19 487 22 488
1.18e-226 21 487 25 487

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.67e-10 143 435 75 348
Crystal Structure Analysis of a GH30 Endoxylanase from Clostridium papyrosolvens C71 [Ruminiclostridium papyrosolvens DSM 2782]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.59e-190 12 487 11 478
Endo-beta-1,6-galactanase OS=Hypocrea rufa OX=5547 GN=6GAL PE=1 SV=1
3.14e-07 18 354 28 445
Exo-beta-1,6-galactobiohydrolase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=bl1,6Gal PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000328 0.999653 CS pos: 21-22. Pr: 0.9780

TMHMM  Annotations      help

There is no transmembrane helices in XP_001904868.1.