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CAZyme Information: XP_001904484.1

You are here: Home > Sequence: XP_001904484.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Podospora anserina
Lineage Ascomycota; Sordariomycetes; ; Podosporaceae; Podospora; Podospora anserina
CAZyme ID XP_001904484.1
CAZy Family AA8
CAZyme Description GMC_OxRdtase_N domain-containing protein [Source:UniProtKB/TrEMBL;Acc:B2AFP5]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
615 67270.44 6.3639
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PanserinaSmat 10888 515849 370 10518
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC - -

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 30 609 6.2e-79 0.5129449838187702

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
235000 PRK02106 2.96e-73 33 607 3 532
choline dehydrogenase; Validated
225186 BetA 2.98e-70 29 612 1 540
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
398739 GMC_oxred_C 6.20e-32 456 601 5 143
GMC oxidoreductase. This domain found associated with pfam00732.
215420 PLN02785 4.45e-25 21 597 41 568
Protein HOTHEAD
366272 GMC_oxred_N 2.05e-21 136 363 19 209
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 615 1 652
0.0 1 615 1 652
4.31e-221 10 606 7 634
4.31e-221 10 606 7 634
2.46e-220 10 606 7 634

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.43e-38 13 609 1 580
Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_B Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_C Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_D Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_E Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_F Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis]
2.48e-38 10 609 58 640
Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
5.56e-38 32 609 4 564
Chain A, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
7.55e-38 35 609 7 564
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
1.02e-37 35 609 7 564
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.39e-51 21 605 27 573
Choline dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Chdh PE=1 SV=1
8.50e-49 26 605 36 576
Choline dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Chdh PE=1 SV=1
5.68e-46 32 606 1 531
Oxygen-dependent choline dehydrogenase OS=Photobacterium profundum (strain SS9) OX=298386 GN=betA PE=3 SV=1
9.47e-46 32 608 1 533
Oxygen-dependent choline dehydrogenase OS=Vibrio vulnificus (strain YJ016) OX=196600 GN=betA PE=3 SV=1
1.02e-45 32 603 1 531
Oxygen-dependent choline dehydrogenase OS=Pseudomonas putida (strain ATCC 700007 / DSM 6899 / BCRC 17059 / F1) OX=351746 GN=betA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.107599 0.892374 CS pos: 19-20. Pr: 0.8340

TMHMM  Annotations      help

There is no transmembrane helices in XP_001904484.1.