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CAZyme Information: VBB87296.1

You are here: Home > Sequence: VBB87296.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Podospora comata
Lineage Ascomycota; Sordariomycetes; ; Podosporaceae; Podospora; Podospora comata
CAZyme ID VBB87296.1
CAZy Family GT41
CAZyme Description Putative Glycosyltransferase Family 55
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
502 LR026970|CGC3 55139.95 5.9442
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcomataTmat 13100 N/A 2652 10448
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in VBB87296.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT55 38 435 3.7e-136 0.9738903394255874

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
401440 Osmo_MPGsynth 1.36e-147 65 435 31 380
Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth). This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP) EC:2.4.1.217, comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
237735 PRK14503 8.31e-95 76 437 44 383
mannosyl-3-phosphoglycerate synthase; Provisional
162866 osmo_MPGsynth 8.91e-84 63 435 30 380
mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
184713 PRK14502 1.10e-72 78 435 50 385
bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 502 1 502
0.0 1 502 1 502
0.0 1 502 1 502
3.39e-87 1 435 81 611
9.73e-84 1 456 65 549

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.99e-54 81 435 49 382
Crystal structure of mannosyl-3-phosphoglycerate synthase from Pyrococcus horikoshii [Pyrococcus horikoshii],2ZU7_B Crystal structure of mannosyl-3-phosphoglycerate synthase from Pyrococcus horikoshii [Pyrococcus horikoshii],2ZU8_A Crystal structure of mannosyl-3-phosphoglycerate synthase from Pyrococcus horikoshii [Pyrococcus horikoshii],2ZU8_B Crystal structure of mannosyl-3-phosphoglycerate synthase from Pyrococcus horikoshii [Pyrococcus horikoshii],2ZU9_A Crystal structure of mannosyl-3-phosphoglycerate synthase from Pyrococcus horikoshii [Pyrococcus horikoshii],2ZU9_B Crystal structure of mannosyl-3-phosphoglycerate synthase from Pyrococcus horikoshii [Pyrococcus horikoshii]
3.44e-53 77 435 47 381
Mannosyl-3-phosphoglycerate synthase from Thermus thermophilus HB27 apoprotein [Thermus thermophilus HB27],2WVK_B Mannosyl-3-phosphoglycerate synthase from Thermus thermophilus HB27 apoprotein [Thermus thermophilus HB27],2WVL_A Mannosyl-3-phosphoglycerate synthase from Thermus thermophilus HB27 in complex with GDP-alpha-D-Mannose and Mg(II) [Thermus thermophilus HB27],2WVL_B Mannosyl-3-phosphoglycerate synthase from Thermus thermophilus HB27 in complex with GDP-alpha-D-Mannose and Mg(II) [Thermus thermophilus HB27]
9.64e-52 77 435 47 381
H309A mutant of Mannosyl-3-phosphoglycerate synthase from Thermus thermophilus HB27 in complex with GDP-alpha-D-Mannose and Mg(II) [Thermus thermophilus HB27],2WVM_B H309A mutant of Mannosyl-3-phosphoglycerate synthase from Thermus thermophilus HB27 in complex with GDP-alpha-D-Mannose and Mg(II) [Thermus thermophilus HB27]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.06e-58 81 435 49 382
Mannosyl-3-phosphoglycerate synthase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) OX=70601 GN=mngA PE=1 SV=1
4.06e-58 70 435 37 382
Mannosyl-3-phosphoglycerate synthase OS=Pyrococcus abyssi (strain GE5 / Orsay) OX=272844 GN=mngA PE=3 SV=1
1.71e-55 82 435 50 382
Mannosyl-3-phosphoglycerate synthase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) OX=186497 GN=mngA PE=3 SV=1
1.63e-37 77 444 44 386
Mannosyl-3-phosphoglycerate synthase OS=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) OX=272557 GN=mngA PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000041 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in VBB87296.1.