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CAZyme Information: VBB86384.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Podospora comata | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Sordariomycetes; ; Podosporaceae; Podospora; Podospora comata | |||||||||||
| CAZyme ID | VBB86384.1 | |||||||||||
| CAZy Family | GT31 | |||||||||||
| CAZyme Description | Putative cellobiose dehydrogenase precursor | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 1.1.99.18:13 | 1.1.99.18:13 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 246 | 791 | 4.8e-241 | 0.9762773722627737 |
| AA8 | 30 | 221 | 6.5e-68 | 0.9945054945054945 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 406418 | CDH-cyt | 6.72e-69 | 30 | 217 | 1 | 177 | Cytochrome domain of cellobiose dehydrogenase. CDH-cyt is the cytochrome domain, at the N-terminus, of cellobiose dehydrogenase. CDH-cyt folds as a beta sandwich with the topology of the antibody Fab V(H) domain and binds iron. The haem iron is ligated by Met83 and His181 in UniProtKB:Q01738. |
| 187688 | CDH_like_cytochrome | 9.35e-43 | 29 | 209 | 1 | 168 | Heme-binding cytochrome domain of fungal cellobiose dehydrogenases. Cellobiose dehydrogenase (CellobioseDH or CDH) is an extracellular fungal oxidoreductase that degrades both lignin and cellulose. Specifically, CDHs oxidize cellobiose, cellodextrins, and lactose to corresponding lactones, utilizing a variety of electron acceptors. Class-II CDHs are monomeric hemoflavoenzymes that are comprised of a b-type cytochrome domain linked to a large flavodehydrogenase domain. The cytochrome domain of CDH and related enzymes, which this model describes, folds as a beta sandwich and complexes a heme molecule. It is found at the N-terminus of this family of enzymes, and belongs to the DOMON domain superfamily, a ligand-interacting motif found in all three kingdoms of life. |
| 225186 | BetA | 8.50e-39 | 252 | 796 | 8 | 541 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| 398739 | GMC_oxred_C | 2.99e-25 | 649 | 784 | 2 | 143 | GMC oxidoreductase. This domain found associated with pfam00732. |
| 235000 | PRK02106 | 5.14e-19 | 444 | 796 | 206 | 542 | choline dehydrogenase; Validated |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 831 | 1 | 831 | |
| 0.0 | 1 | 831 | 1 | 826 | |
| 0.0 | 1 | 831 | 1 | 826 | |
| 0.0 | 1 | 831 | 1 | 831 | |
| 0.0 | 1 | 831 | 1 | 830 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 0.0 | 27 | 831 | 4 | 806 | Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A],4QI7_B Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A] |
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| 0.0 | 245 | 831 | 1 | 585 | Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides],4QI5_A Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides] |
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| 0.0 | 24 | 831 | 2 | 807 | Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides] |
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| 8.84e-123 | 245 | 791 | 1 | 542 | Chain A, cellobiose dehydrogenase [Phanerodontia chrysosporium],1KDG_B Chain B, cellobiose dehydrogenase [Phanerodontia chrysosporium] |
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| 4.17e-122 | 250 | 791 | 1 | 537 | Chain A, Cellobiose dehydrogenase [Phanerodontia chrysosporium],1NAA_B Chain B, Cellobiose dehydrogenase [Phanerodontia chrysosporium] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.16e-152 | 20 | 791 | 16 | 769 | Cellobiose dehydrogenase OS=Phanerodontia chrysosporium OX=2822231 GN=CDH-1 PE=1 SV=1 |
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| 7.86e-21 | 253 | 793 | 4 | 530 | Oxygen-dependent choline dehydrogenase OS=Rhizobium etli (strain CIAT 652) OX=491916 GN=betA PE=3 SV=1 |
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| 1.04e-20 | 253 | 801 | 4 | 545 | Oxygen-dependent choline dehydrogenase OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=betA PE=3 SV=1 |
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| 1.04e-20 | 253 | 793 | 4 | 530 | Oxygen-dependent choline dehydrogenase OS=Rhizobium leguminosarum bv. viciae (strain 3841) OX=216596 GN=betA PE=3 SV=1 |
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| 1.00e-19 | 253 | 793 | 4 | 530 | Oxygen-dependent choline dehydrogenase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) OX=347834 GN=betA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000323 | 0.999671 | CS pos: 22-23. Pr: 0.9773 |