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CAZyme Information: VBB83559.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Podospora comata | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Sordariomycetes; ; Podosporaceae; Podospora; Podospora comata | |||||||||||
| CAZyme ID | VBB83559.1 | |||||||||||
| CAZy Family | GH72 | |||||||||||
| CAZyme Description | Putative GMC oxidoreductase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 38 | 666 | 8.4e-91 | 0.9947183098591549 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 235000 | PRK02106 | 3.08e-57 | 36 | 665 | 3 | 532 | choline dehydrogenase; Validated |
| 225186 | BetA | 1.19e-55 | 36 | 668 | 5 | 537 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| 398739 | GMC_oxred_C | 1.17e-31 | 510 | 660 | 1 | 143 | GMC oxidoreductase. This domain found associated with pfam00732. |
| 366272 | GMC_oxred_N | 3.06e-17 | 142 | 408 | 22 | 218 | GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
| 215420 | PLN02785 | 2.51e-14 | 36 | 656 | 53 | 568 | Protein HOTHEAD |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 671 | 1 | 671 | |
| 0.0 | 1 | 671 | 1 | 671 | |
| 0.0 | 1 | 671 | 1 | 671 | |
| 2.66e-209 | 35 | 669 | 30 | 667 | |
| 1.03e-202 | 12 | 671 | 13 | 665 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5.84e-31 | 36 | 668 | 3 | 531 | Crystal structure of the V465T mutant of 5-(Hydroxymethyl)furfural Oxidase (HMFO) [Methylovorus sp. MP688],6F97_B Crystal structure of the V465T mutant of 5-(Hydroxymethyl)furfural Oxidase (HMFO) [Methylovorus sp. MP688] |
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| 5.84e-31 | 36 | 668 | 3 | 531 | Crystal structure of 5-hydroxymethylfurfural oxidase (HMFO) in the oxidized state [Methylovorus sp. MP688],4UDP_B Crystal structure of 5-hydroxymethylfurfural oxidase (HMFO) in the oxidized state [Methylovorus sp. MP688],4UDQ_A Crystal structure of 5-hydroxymethylfurfural oxidase (HMFO) in the reduced state [Methylovorus sp. MP688],4UDQ_B Crystal structure of 5-hydroxymethylfurfural oxidase (HMFO) in the reduced state [Methylovorus sp. MP688] |
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| 6.17e-30 | 36 | 668 | 3 | 531 | Crystal structure of the H467A mutant of 5-hydroxymethylfurfural oxidase (HMFO) [Methylovorus sp. MP688],4UDR_B Crystal structure of the H467A mutant of 5-hydroxymethylfurfural oxidase (HMFO) [Methylovorus sp. MP688] |
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| 6.31e-29 | 39 | 667 | 2 | 564 | Crystal structure of aryl-alcohol oxidase from Pleurotus eryngii in complex with p-anisic acid [Pleurotus eryngii] |
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| 2.71e-28 | 39 | 667 | 3 | 565 | Crystal structure of aryl-alcohol-oxidase from Pleurotus eryingii [Pleurotus eryngii] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.74e-37 | 12 | 668 | 11 | 611 | Oxidoreductase cicC OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=cicC PE=1 SV=1 |
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| 1.33e-36 | 39 | 665 | 5 | 531 | Oxygen-dependent choline dehydrogenase OS=Vibrio vulnificus (strain YJ016) OX=196600 GN=betA PE=3 SV=1 |
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| 1.80e-36 | 39 | 665 | 5 | 531 | Oxygen-dependent choline dehydrogenase OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=betA PE=3 SV=1 |
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| 3.60e-36 | 36 | 671 | 2 | 544 | Oxygen-dependent choline dehydrogenase OS=Photobacterium profundum (strain SS9) OX=298386 GN=betA PE=3 SV=1 |
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| 1.31e-35 | 40 | 665 | 4 | 526 | Oxygen-dependent choline dehydrogenase OS=Brucella anthropi (strain ATCC 49188 / DSM 6882 / CCUG 24695 / JCM 21032 / LMG 3331 / NBRC 15819 / NCTC 12168 / Alc 37) OX=439375 GN=betA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000488 | 0.999472 | CS pos: 21-22. Pr: 0.9755 |