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CAZyme Information: VBB82011.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Podospora comata | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Sordariomycetes; ; Podosporaceae; Podospora; Podospora comata | |||||||||||
| CAZyme ID | VBB82011.1 | |||||||||||
| CAZy Family | GH55 | |||||||||||
| CAZyme Description | Putative Glycoside Hydrolase Family 61 | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA9 | 40 | 236 | 1.4e-42 | 0.8727272727272727 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 410622 | LPMO_AA9 | 1.13e-51 | 55 | 253 | 29 | 216 | lytic polysaccharide monooxygenase (LPMO) auxiliary activity family 9 (AA9). AA9 proteins are copper-dependent lytic polysaccharide monooxygenases (LPMOs) involved in the cleavage of cellulose chains with oxidation of carbons C1 and/or C4 and C6. Activities include lytic cellulose monooxygenase (C1-hydroxylating) (EC 1.14.99.54) and lytic cellulose monooxygenase (C4-dehydrogenating) (EC 1.14.99.56). The family used to be called GH61 because weak endoglucanase activity had been demonstrated in some family members. |
| 397484 | Glyco_hydro_61 | 9.72e-45 | 33 | 245 | 11 | 211 | Glycosyl hydrolase family 61. Although weak endoglucanase activity has been demonstrated in several members of this family, they lack the clustered conserved catalytic acidic amino acids present in most glycoside hydrolases. Many members of this family lack measurable cellulase activity on their own, but enhance the activity of other cellulolytic enzymes. They are therefore unlikely to be true glycoside hydrolases. The subsrate-binding surface of this family is a flat Ig-like fold. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 4.09e-211 | 1 | 262 | 1 | 262 | |
| 4.52e-150 | 12 | 228 | 18 | 232 | |
| 4.52e-150 | 12 | 228 | 18 | 232 | |
| 1.49e-103 | 35 | 255 | 35 | 254 | |
| 6.25e-97 | 12 | 255 | 14 | 250 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7.57e-46 | 52 | 255 | 30 | 225 | Crystal structure of HiLPMO9B [Heterobasidion irregulare TC 32-1],5NNS_B Crystal structure of HiLPMO9B [Heterobasidion irregulare TC 32-1] |
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| 1.01e-31 | 52 | 255 | 29 | 227 | Crystal Structure of a Cellulose-active Polysaccharide Monooxygenase from M. thermophila (MtPMO3*) [Thermothelomyces thermophilus ATCC 42464],5UFV_B Crystal Structure of a Cellulose-active Polysaccharide Monooxygenase from M. thermophila (MtPMO3*) [Thermothelomyces thermophilus ATCC 42464],5UFV_C Crystal Structure of a Cellulose-active Polysaccharide Monooxygenase from M. thermophila (MtPMO3*) [Thermothelomyces thermophilus ATCC 42464],5UFV_D Crystal Structure of a Cellulose-active Polysaccharide Monooxygenase from M. thermophila (MtPMO3*) [Thermothelomyces thermophilus ATCC 42464],5UFV_E Crystal Structure of a Cellulose-active Polysaccharide Monooxygenase from M. thermophila (MtPMO3*) [Thermothelomyces thermophilus ATCC 42464],5UFV_F Crystal Structure of a Cellulose-active Polysaccharide Monooxygenase from M. thermophila (MtPMO3*) [Thermothelomyces thermophilus ATCC 42464] |
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| 1.30e-23 | 65 | 255 | 50 | 228 | Chain A, Lytic polysaccharide monooxygenase [Talaromyces verruculosus] |
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| 1.74e-20 | 60 | 253 | 41 | 223 | Structural basis for substrate targeting and catalysis by fungal polysaccharide monooxygenases (PMO-3) [Neurospora crassa OR74A] |
|
| 1.74e-20 | 60 | 253 | 41 | 223 | Structural basis for substrate targeting and catalysis by fungal polysaccharide monooxygenases (PMO-3) [Neurospora crassa OR74A] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.44e-44 | 52 | 257 | 59 | 258 | Cellulose-growth-specific protein OS=Agaricus bisporus OX=5341 GN=cel1 PE=3 SV=1 |
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| 7.11e-18 | 65 | 255 | 72 | 249 | Endoglucanase-7 OS=Hypocrea jecorina (strain QM6a) OX=431241 GN=cel61b PE=1 SV=3 |
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| 1.73e-17 | 35 | 256 | 38 | 249 | Endoglucanase-4 OS=Hypocrea jecorina OX=51453 GN=cel61a PE=1 SV=1 |
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| 3.20e-17 | 16 | 255 | 12 | 245 | Polysaccharide monooxygenase Cel61a OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Cel61a PE=1 SV=1 |
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| 1.68e-10 | 60 | 260 | 50 | 238 | Endo-beta-1,4-glucanase D OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=eglD PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000051 | 0.000027 |