logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: VBB81723.1

You are here: Home > Sequence: VBB81723.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Podospora comata
Lineage Ascomycota; Sordariomycetes; ; Podosporaceae; Podospora; Podospora comata
CAZyme ID VBB81723.1
CAZy Family GH5
CAZyme Description Putative protein of unknown function
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
472 LR026968|CGC19 54249.70 6.2391
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcomataTmat 13100 N/A 2652 10448
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in VBB81723.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT31 155 334 1.5e-19 0.953125

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
250845 Galactosyl_T 6.56e-12 155 327 1 179
Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 472 1 472
5.00e-111 100 457 60 424
2.29e-99 109 457 61 415
1.34e-97 89 412 47 359
9.02e-97 102 457 39 396

PDB Hits      help

VBB81723.1 has no PDB hit.

Swiss-Prot Hits      help

VBB81723.1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000021 0.000011

TMHMM  Annotations      download full data without filtering help

Start End
21 43