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CAZyme Information: VBB81648.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Podospora comata | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Sordariomycetes; ; Podosporaceae; Podospora; Podospora comata | |||||||||||
| CAZyme ID | VBB81648.1 | |||||||||||
| CAZy Family | GH5 | |||||||||||
| CAZyme Description | Putative Glycoside Hydrolase Family 27 | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.22:58 | 2.4.1.-:1 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH27 | 126 | 408 | 7.3e-61 | 0.9912663755458515 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 269893 | GH27 | 3.49e-113 | 28 | 327 | 1 | 271 | glycosyl hydrolase family 27 (GH27). GH27 enzymes occur in eukaryotes, prokaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-N-acetylgalactosaminidase, and 3-alpha-isomalto-dextranase. All GH27 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH27 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively. |
| 166449 | PLN02808 | 2.48e-84 | 22 | 421 | 26 | 376 | alpha-galactosidase |
| 177874 | PLN02229 | 7.56e-84 | 22 | 435 | 57 | 424 | alpha-galactosidase |
| 178295 | PLN02692 | 2.63e-81 | 22 | 328 | 50 | 320 | alpha-galactosidase |
| 374582 | Melibiase_2 | 5.69e-66 | 28 | 327 | 2 | 284 | Alpha galactosidase A. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 443 | 1 | 443 | |
| 0.0 | 1 | 434 | 1 | 438 | |
| 0.0 | 1 | 434 | 1 | 438 | |
| 6.56e-196 | 8 | 430 | 7 | 446 | |
| 3.62e-189 | 9 | 430 | 246 | 735 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.07e-138 | 19 | 430 | 2 | 412 | Chain A, alpha-galactosidase [Trichoderma reesei],1T0O_A Chain A, alpha-galactosidase [Trichoderma reesei] |
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| 1.22e-84 | 20 | 421 | 1 | 383 | Crystal structure of alpha-galactosidase I from Mortierella vinacea [Umbelopsis vinacea] |
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| 3.17e-75 | 22 | 429 | 3 | 361 | Nicotiana benthamiana alpha-galactosidase [Nicotiana benthamiana] |
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| 2.93e-72 | 22 | 327 | 3 | 272 | Chain A, alpha-galactosidase [Oryza sativa] |
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| 7.76e-64 | 20 | 386 | 22 | 376 | Chain A, Alpha-galactosidase 1 [Saccharomyces cerevisiae],3LRL_A Chain A, Alpha-galactosidase 1 [Saccharomyces cerevisiae] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7.33e-157 | 9 | 428 | 11 | 438 | Probable alpha-galactosidase B OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=aglB PE=3 SV=1 |
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| 2.96e-156 | 9 | 428 | 11 | 438 | Probable alpha-galactosidase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=aglB PE=3 SV=1 |
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| 8.10e-155 | 5 | 431 | 10 | 446 | Probable alpha-galactosidase B OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=aglB PE=3 SV=1 |
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| 2.31e-154 | 5 | 431 | 10 | 446 | Probable alpha-galactosidase B OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=aglB PE=3 SV=2 |
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| 3.54e-153 | 1 | 431 | 2 | 434 | Probable alpha-galactosidase B OS=Penicillium simplicissimum OX=69488 GN=agl1 PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.001349 | 0.998604 | CS pos: 17-18. Pr: 0.8952 |