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CAZyme Information: VBB81035.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Podospora comata | |||||||||||
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| Lineage | Ascomycota; Sordariomycetes; ; Podosporaceae; Podospora; Podospora comata | |||||||||||
| CAZyme ID | VBB81035.1 | |||||||||||
| CAZy Family | GH43 | |||||||||||
| CAZyme Description | Putative Glycoside Hydrolase Family 7 | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.176:83 | 3.2.1.132:6 | 3.2.1.4:2 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH7 | 22 | 460 | 3e-122 | 0.9903614457831326 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395677 | Glyco_hydro_7 | 4.91e-155 | 22 | 459 | 2 | 434 | Glycosyl hydrolase family 7. |
| 153432 | GH7_CBH_EG | 5.05e-115 | 26 | 454 | 1 | 386 | Glycosyl hydrolase family 7. Glycosyl hydrolase family 7 contains eukaryotic endoglucanases (EGs) and cellobiohydrolases (CBHs) that hydrolyze glycosidic bonds using a double-displacement mechanism. This leads to a net retention of the conformation at the anomeric carbon. Both enzymes work synergistically in the degradation of cellulose,which is the main component of plant cell wall, and is composed of beta-1,4 linked glycosyl units. EG cleaves the beta-1,4 linkages of cellulose and CBH cleaves off cellobiose disaccharide units from the reducing end of the chain. In general, the O-glycosyl hydrolases are a widespread group of enzymes that hydrolyze the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A glycosyl hydrolase classification system based on sequence similarity has led to the definition of more than 95 different families inlcuding glycoside hydrolase family 7. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 462 | 1 | 462 | |
| 4.03e-220 | 93 | 462 | 1 | 331 | |
| 4.87e-134 | 19 | 461 | 23 | 451 | |
| 4.87e-134 | 19 | 461 | 23 | 451 | |
| 4.87e-134 | 19 | 461 | 23 | 451 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.64e-135 | 20 | 461 | 2 | 429 | Crystal Structure of Cellobiohydrolase from Melanocarpus albomyces [Melanocarpus albomyces],2RFW_B Crystal Structure of Cellobiohydrolase from Melanocarpus albomyces [Melanocarpus albomyces],2RFW_C Crystal Structure of Cellobiohydrolase from Melanocarpus albomyces [Melanocarpus albomyces],2RFW_D Crystal Structure of Cellobiohydrolase from Melanocarpus albomyces [Melanocarpus albomyces],2RFY_A Crystal structure of cellobiohydrolase from Melanocarpus albomyces complexed with cellobiose [Melanocarpus albomyces],2RFY_B Crystal structure of cellobiohydrolase from Melanocarpus albomyces complexed with cellobiose [Melanocarpus albomyces],2RFY_C Crystal structure of cellobiohydrolase from Melanocarpus albomyces complexed with cellobiose [Melanocarpus albomyces],2RFY_D Crystal structure of cellobiohydrolase from Melanocarpus albomyces complexed with cellobiose [Melanocarpus albomyces],2RFZ_A Crystal structure of cellobiohydrolase from Melanocarpus albomyces complexed with cellotriose [Melanocarpus albomyces],2RFZ_B Crystal structure of cellobiohydrolase from Melanocarpus albomyces complexed with cellotriose [Melanocarpus albomyces],2RFZ_C Crystal structure of cellobiohydrolase from Melanocarpus albomyces complexed with cellotriose [Melanocarpus albomyces],2RFZ_D Crystal structure of cellobiohydrolase from Melanocarpus albomyces complexed with cellotriose [Melanocarpus albomyces],2RG0_A Crystal structure of cellobiohydrolase from Melanocarpus albomyces complexed with cellotetraose [Melanocarpus albomyces],2RG0_B Crystal structure of cellobiohydrolase from Melanocarpus albomyces complexed with cellotetraose [Melanocarpus albomyces],2RG0_C Crystal structure of cellobiohydrolase from Melanocarpus albomyces complexed with cellotetraose [Melanocarpus albomyces],2RG0_D Crystal structure of cellobiohydrolase from Melanocarpus albomyces complexed with cellotetraose [Melanocarpus albomyces] |
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| 2.18e-95 | 22 | 459 | 4 | 433 | Chain A, cellobiohydrolase I catalytic domain [Rasamsonia emersonii],3PFJ_A Chain A, Cellobiohydrolase 1 catalytic domain [Rasamsonia emersonii],3PFX_A Chain A, Cellobiohydrolase 1 catalytic domain [Rasamsonia emersonii],3PFZ_A Chain A, Cellobiohydrolase 1 catalytic domain [Rasamsonia emersonii],3PL3_A Chain A, Cellobiohydrolase 1 catalytic domain [Rasamsonia emersonii] |
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| 4.61e-95 | 23 | 460 | 5 | 434 | Chain A, CELLULASE [[Humicola] grisea var. thermoidea],4CSI_B Chain B, CELLULASE [[Humicola] grisea var. thermoidea] |
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| 2.66e-94 | 24 | 461 | 6 | 435 | Biochemical and structural insights into the catalytic mechanism of thermostable cellobiohydrolase Cel7A from industrially relevant fungus Myceliophthora thermophila [Thermothelomyces thermophilus],5W11_B Biochemical and structural insights into the catalytic mechanism of thermostable cellobiohydrolase Cel7A from industrially relevant fungus Myceliophthora thermophila [Thermothelomyces thermophilus] |
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| 1.47e-86 | 20 | 461 | 2 | 437 | Dictyostelium discoideum cellobiohydrolase Cel7A apo structure [Dictyostelium discoideum] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 8.95e-95 | 12 | 460 | 12 | 452 | Exoglucanase 1 OS=Humicola grisea var. thermoidea OX=5528 GN=CBH-1 PE=1 SV=2 |
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| 2.17e-92 | 18 | 459 | 18 | 451 | Exoglucanase 1 OS=Cryphonectria parasitica OX=5116 GN=CBH-1 PE=3 SV=1 |
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| 9.53e-91 | 18 | 461 | 17 | 451 | Probable 1,4-beta-D-glucan cellobiohydrolase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=cbhA PE=3 SV=1 |
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| 9.53e-91 | 18 | 461 | 17 | 451 | Probable 1,4-beta-D-glucan cellobiohydrolase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=cbhA PE=3 SV=1 |
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| 2.10e-89 | 18 | 459 | 17 | 447 | 1,4-beta-D-glucan cellobiohydrolase A OS=Aspergillus niger OX=5061 GN=cbhA PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000210 | 0.999753 | CS pos: 18-19. Pr: 0.9798 |