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CAZyme Information: VBB80438.1

You are here: Home > Sequence: VBB80438.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Podospora comata
Lineage Ascomycota; Sordariomycetes; ; Podosporaceae; Podospora; Podospora comata
CAZyme ID VBB80438.1
CAZy Family GH18
CAZyme Description Putative protein of unknown function
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
522 LR026967|CGC24 54098.60 4.7554
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcomataTmat 13100 N/A 2652 10448
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in VBB80438.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA11 19 222 1.6e-63 0.9476439790575916

CDD Domains      help

VBB80438.1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 522 1 522
2.87e-295 1 522 1 516
2.87e-295 1 522 1 516
6.66e-141 9 365 5 376
1.35e-115 1 365 4 403

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.32e-34 19 222 1 198
Structure of Aspergillus oryzae AA11 Lytic Polysaccharide Monooxygenase with Zn [Aspergillus oryzae],4MAI_A Structure of Aspergillus oryzae AA11 Lytic Polysaccharide Monooxygenase with Cu(I) [Aspergillus oryzae]

Swiss-Prot Hits      help

VBB80438.1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.002630 0.997349 CS pos: 18-19. Pr: 0.5071

TMHMM  Annotations      help

There is no transmembrane helices in VBB80438.1.