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CAZyme Information: VBB78175.1

You are here: Home > Sequence: VBB78175.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Podospora comata
Lineage Ascomycota; Sordariomycetes; ; Podosporaceae; Podospora; Podospora comata
CAZyme ID VBB78175.1
CAZy Family GH10
CAZyme Description Putative protein of unknown function
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
413 42019.87 7.1503
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcomataTmat 13100 N/A 2652 10448
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in VBB78175.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA11 24 229 5.4e-67 0.9790575916230366

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
223021 PHA03247 1.60e-04 177 338 2701 2855
large tegument protein UL36; Provisional
236090 PRK07764 7.54e-04 228 348 392 511
DNA polymerase III subunits gamma and tau; Validated
237864 PRK14950 0.001 241 356 361 471
DNA polymerase III subunits gamma and tau; Provisional
237057 PRK12323 0.002 159 379 371 589
DNA polymerase III subunit gamma/tau.
236090 PRK07764 0.006 218 341 599 716
DNA polymerase III subunits gamma and tau; Validated

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
9.99e-270 1 413 1 413
2.62e-265 1 413 1 413
2.62e-265 1 413 1 413
4.48e-146 1 413 1 414
1.54e-116 1 408 1 412

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.51e-39 24 221 1 196
Structure of Aspergillus oryzae AA11 Lytic Polysaccharide Monooxygenase with Zn [Aspergillus oryzae],4MAI_A Structure of Aspergillus oryzae AA11 Lytic Polysaccharide Monooxygenase with Cu(I) [Aspergillus oryzae]

Swiss-Prot Hits      help

VBB78175.1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000251 0.999741 CS pos: 23-24. Pr: 0.9757

TMHMM  Annotations      help

There is no transmembrane helices in VBB78175.1.