logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: VBB73840.1

You are here: Home > Sequence: VBB73840.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Podospora comata
Lineage Ascomycota; Sordariomycetes; ; Podosporaceae; Podospora; Podospora comata
CAZyme ID VBB73840.1
CAZy Family AA8
CAZyme Description Putative Glycoside Hydrolase Family 61
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
322 31955.44 7.9297
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcomataTmat 13100 N/A 2652 10448
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.14.99.56:2 1.14.99.54:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA9 8 219 3e-59 0.9681818181818181

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
410622 LPMO_AA9 3.54e-63 20 234 1 216
lytic polysaccharide monooxygenase (LPMO) auxiliary activity family 9 (AA9). AA9 proteins are copper-dependent lytic polysaccharide monooxygenases (LPMOs) involved in the cleavage of cellulose chains with oxidation of carbons C1 and/or C4 and C6. Activities include lytic cellulose monooxygenase (C1-hydroxylating) (EC 1.14.99.54) and lytic cellulose monooxygenase (C4-dehydrogenating) (EC 1.14.99.56). The family used to be called GH61 because weak endoglucanase activity had been demonstrated in some family members.
397484 Glyco_hydro_61 6.27e-61 34 226 29 211
Glycosyl hydrolase family 61. Although weak endoglucanase activity has been demonstrated in several members of this family, they lack the clustered conserved catalytic acidic amino acids present in most glycoside hydrolases. Many members of this family lack measurable cellulase activity on their own, but enhance the activity of other cellulolytic enzymes. They are therefore unlikely to be true glycoside hydrolases. The subsrate-binding surface of this family is a flat Ig-like fold.
395595 CBM_1 5.92e-07 290 317 1 29
Fungal cellulose binding domain.
197593 fCBD 4.17e-05 291 321 3 33
Fungal-type cellulose-binding domain. Small four-cysteine cellulose-binding domain of fungi

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.05e-225 1 322 1 322
6.81e-222 1 322 1 322
6.81e-222 1 322 1 322
5.85e-166 1 322 1 331
1.37e-157 1 322 1 341

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.85e-32 34 235 21 222
Neurospora crassa polysaccharide monooxygenase 2 resting state joint X-ray/neutron refinement [Neurospora crassa]
2.85e-32 34 235 21 222
Neurospora crassa polysaccharide monooxygenase 2 high mannosylation [Neurospora crassa],5TKF_B Neurospora crassa polysaccharide monooxygenase 2 high mannosylation [Neurospora crassa],5TKF_C Neurospora crassa polysaccharide monooxygenase 2 high mannosylation [Neurospora crassa],5TKF_D Neurospora crassa polysaccharide monooxygenase 2 high mannosylation [Neurospora crassa],5TKG_A Neurospora crassa polysaccharide monooxygenase 2 resting state [Neurospora crassa],5TKG_B Neurospora crassa polysaccharide monooxygenase 2 resting state [Neurospora crassa],5TKH_A Neurospora crassa polysaccharide monooxygenase 2 ascorbate treated [Neurospora crassa],5TKH_B Neurospora crassa polysaccharide monooxygenase 2 ascorbate treated [Neurospora crassa],5TKI_B Neurospora crassa polysaccharide monooxygenase 2 resting state joint X-ray/neutron refinement [Neurospora crassa]
7.81e-32 34 235 21 222
Structural basis for substrate targeting and catalysis by fungal polysaccharide monooxygenases (PMO-2) [Neurospora crassa OR74A],4EIR_B Structural basis for substrate targeting and catalysis by fungal polysaccharide monooxygenases (PMO-2) [Neurospora crassa OR74A]
5.84e-30 34 235 21 220
Chain A, AA9 [Panus similis],6RS9_A Chain A, AA9 [Panus similis]
6.77e-30 34 235 21 226
The structure of the catalytic domain of NcLPMO9C from the filamentous fungus Neurospora crassa [Neurospora crassa OR74A],4D7U_B The structure of the catalytic domain of NcLPMO9C from the filamentous fungus Neurospora crassa [Neurospora crassa OR74A],4D7V_A The structure of the catalytic domain of NcLPMO9C from the filamentous fungus Neurospora crassa [Neurospora crassa OR74A],4D7V_B The structure of the catalytic domain of NcLPMO9C from the filamentous fungus Neurospora crassa [Neurospora crassa OR74A]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.42e-45 1 321 1 346
Probable endo-beta-1,4-glucanase D OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=eglD PE=3 SV=1
3.65e-44 1 321 1 346
Probable endo-beta-1,4-glucanase D OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=eglD PE=3 SV=1
3.80e-43 1 321 1 345
Probable endo-beta-1,4-glucanase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=eglD PE=3 SV=1
4.26e-43 1 321 1 350
Probable endo-beta-1,4-glucanase D OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=eglD PE=3 SV=1
1.32e-35 1 321 1 357
Probable endo-beta-1,4-glucanase D OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=eglD PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000606 0.999357 CS pos: 19-20. Pr: 0.9364

TMHMM  Annotations      help

There is no transmembrane helices in VBB73840.1.