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CAZyme Information: VBB73104.1

You are here: Home > Sequence: VBB73104.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Podospora comata
Lineage Ascomycota; Sordariomycetes; ; Podosporaceae; Podospora; Podospora comata
CAZyme ID VBB73104.1
CAZy Family AA7
CAZyme Description Putative GMC oxidoreductase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
601 64886.52 9.5920
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcomataTmat 13100 N/A 2652 10448
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in VBB73104.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 28 596 7.6e-169 0.9947183098591549

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225186 BetA 5.89e-91 26 597 5 536
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000 PRK02106 1.99e-88 28 594 5 531
choline dehydrogenase; Validated
398739 GMC_oxred_C 3.34e-41 451 590 1 143
GMC oxidoreductase. This domain found associated with pfam00732.
366272 GMC_oxred_N 1.52e-28 96 321 13 217
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
215420 PLN02785 2.59e-21 25 601 52 583
Protein HOTHEAD

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 601 1 601
0.0 1 601 1 601
3.90e-204 21 600 17 599
6.12e-204 9 596 11 601
2.90e-198 23 599 18 598

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.68e-67 27 599 4 569
Crystal structure of Aspergillus flavus FAD glucose dehydrogenase [Aspergillus flavus NRRL3357],4YNU_A Crystal structure of Aspergillus flavus FADGDH in complex with D-glucono-1,5-lactone [Aspergillus flavus NRRL3357]
1.54e-62 29 594 2 561
Crystal structure of aryl-alcohol oxidase from Pleurotus eryngii in complex with p-anisic acid [Pleurotus eryngii]
8.16e-62 29 594 3 562
Crystal structure of aryl-alcohol-oxidase from Pleurotus eryingii [Pleurotus eryngii]
6.64e-59 26 594 14 587
Chain A, Oligosaccharide dehydrogenase [Trametes cinnabarina],6XUU_A Chain A, Oligosaccharide dehydrogenase [Trametes cinnabarina],6XUV_A Chain A, Oligosaccharide dehydrogenase [Trametes cinnabarina]
4.35e-58 26 597 22 582
Glucose Oxidase From Penicillium Amagasakiense [Penicillium amagasakiense],1GPE_B Glucose Oxidase From Penicillium Amagasakiense [Penicillium amagasakiense]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.28e-90 26 595 44 616
GMC oxidoreductase family protein Mala s 12 OS=Malassezia sympodialis (strain ATCC 42132) OX=1230383 GN=MSY001_2108 PE=1 SV=1
1.28e-90 26 595 44 616
GMC oxidoreductase family protein Mala s 12.0101 OS=Malassezia sympodialis OX=76777 PE=1 SV=2
1.98e-76 27 597 38 632
Dehydrogenase ARMGADRAFT_1018426 OS=Armillaria gallica OX=47427 GN=ARMGADRAFT_1018426 PE=1 SV=1
3.02e-74 29 601 14 616
Dehydrogenase mpl7 OS=Monascus purpureus OX=5098 GN=mpl7 PE=1 SV=1
3.02e-74 29 601 14 616
Dehydrogenase citC OS=Monascus ruber OX=89489 GN=citC PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.001339 0.998632 CS pos: 21-22. Pr: 0.9613

TMHMM  Annotations      help

There is no transmembrane helices in VBB73104.1.