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CAZyme Information: TSTA_123230-t26_1-p1

You are here: Home > Sequence: TSTA_123230-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Talaromyces stipitatus
Lineage Ascomycota; Eurotiomycetes; ; Trichocomaceae; Talaromyces; Talaromyces stipitatus
CAZyme ID TSTA_123230-t26_1-p1
CAZy Family GT32
CAZyme Description pectin methylesterase, putative
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
405 EQ962655|CGC5 44214.15 5.3298
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TstipitatusATCC10500 12629 441959 146 12483
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in TSTA_123230-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 61 362 4.1e-53 0.9027777777777778

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
215367 PLN02682 8.67e-21 46 362 67 342
pectinesterase family protein
178051 PLN02432 3.29e-20 66 361 23 266
putative pectinesterase
178372 PLN02773 4.53e-18 65 361 16 276
pectinesterase
178113 PLN02497 1.05e-16 37 362 17 301
probable pectinesterase
178098 PLN02480 3.68e-16 66 404 60 338
Probable pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.21e-252 1 404 1 403
2.39e-205 33 404 32 400
6.58e-159 28 401 22 381
3.55e-156 12 401 4 381
1.07e-150 16 400 6 382

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.13e-20 66 338 19 256
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
1.55e-20 66 338 19 256
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
1.26e-10 66 362 19 280
Pectin methylesterase from Carrot [Daucus carota]
2.84e-08 40 322 24 300
Pectin methylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.38e-22 15 338 9 284
Probable pectinesterase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pmeA PE=3 SV=1
1.80e-20 66 402 45 324
Pectinesterase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pmeA PE=1 SV=1
1.14e-19 66 338 44 281
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1
1.55e-19 66 338 44 281
Probable pectinesterase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pmeA PE=3 SV=1
1.55e-19 66 338 44 281
Probable pectinesterase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000459 0.999528 CS pos: 25-26. Pr: 0.9769

TMHMM  Annotations      help

There is no transmembrane helices in TSTA_123230-t26_1-p1.