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CAZyme Information: TSTA_112170-t26_1-p1

You are here: Home > Sequence: TSTA_112170-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Talaromyces stipitatus
Lineage Ascomycota; Eurotiomycetes; ; Trichocomaceae; Talaromyces; Talaromyces stipitatus
CAZyme ID TSTA_112170-t26_1-p1
CAZy Family GT2
CAZyme Description endo-1,6-beta-D-glucanase BGN16.3 precursor, putative
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
462 EQ962655|CGC18 50192.08 4.8048
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TstipitatusATCC10500 12629 441959 146 12483
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8:3 3.2.1.-:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 23 458 3.1e-181 0.9954853273137697

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
227807 XynC 2.86e-26 5 458 6 427
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
405300 Glyco_hydr_30_2 1.69e-10 26 344 4 354
O-Glycosyl hydrolase family 30.
307945 Glyco_hydro_30 1.31e-09 37 286 1 241
Glycosyl hydrolase family 30 TIM-barrel domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.23e-285 14 461 12 473
5.73e-194 20 459 25 475
3.79e-182 20 460 31 484
3.79e-182 20 460 31 484
3.79e-182 20 460 31 484

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.46e-286 14 461 12 473
Chain A, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612],6IUJ_B Chain B, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612]
2.37e-284 25 461 94 544
Crystal structure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris [Saccharomyces uvarum],6KRN_A Crystal structure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris in complex with aldotriuronic acid [Saccharomyces uvarum]
6.68e-116 24 458 3 446
Chain A, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464],7O0E_G Chain G, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
1.35e-114 24 458 10 453
Chain AAA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
3.82e-101 26 458 25 452
Chain A, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612],6M5Z_B Chain B, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.37e-116 24 458 27 470
GH30 family xylanase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Xyn30A PE=1 SV=1
1.57e-09 29 458 69 486
Endo-1,6-beta-D-glucanase BGN16.3 OS=Trichoderma harzianum OX=5544 PE=1 SV=1
4.02e-08 320 460 276 421
Glucuronoxylanase XynC OS=Bacillus subtilis (strain 168) OX=224308 GN=xynC PE=1 SV=1
5.13e-07 138 460 112 422
Glucuronoxylanase XynC OS=Bacillus subtilis OX=1423 GN=xynC PE=3 SV=2
1.40e-06 26 386 87 452
Putative glucosylceramidase 1 OS=Caenorhabditis elegans OX=6239 GN=gba-1 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.003455 0.996493 CS pos: 18-19. Pr: 0.9721

TMHMM  Annotations      help

There is no transmembrane helices in TSTA_112170-t26_1-p1.