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CAZyme Information: TSTA_097140-t26_1-p1

You are here: Home > Sequence: TSTA_097140-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Talaromyces stipitatus
Lineage Ascomycota; Eurotiomycetes; ; Trichocomaceae; Talaromyces; Talaromyces stipitatus
CAZyme ID TSTA_097140-t26_1-p1
CAZy Family GH55|GH55
CAZyme Description extracellular polygalacturonase, putative
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
384 EQ962653|CGC12 39426.34 4.1558
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TstipitatusATCC10500 12629 441959 146 12483
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.15:80

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 57 383 2.9e-71 0.963076923076923

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 1.22e-115 60 382 1 321
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
178580 PLN03003 9.30e-27 111 341 114 336
Probable polygalacturonase At3g15720
177865 PLN02218 1.91e-21 57 375 92 417
polygalacturonase ADPG
227721 Pgu1 3.51e-21 155 297 251 398
Polygalacturonase [Carbohydrate transport and metabolism].
165802 PLN02155 3.22e-19 144 368 150 367
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.12e-231 10 383 10 383
8.56e-211 9 383 12 386
1.27e-201 14 383 13 380
1.99e-191 13 383 12 379
1.99e-191 13 383 12 379

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.85e-145 39 382 1 339
Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus]
1.45e-140 31 382 1 344
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
1.45e-140 31 382 1 344
Chain A, endo-polygalacturonase [Evansstolkia leycettana]
2.07e-138 41 382 2 336
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
2.15e-136 41 378 2 333
Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.54e-192 13 383 12 379
Endopolygalacturonase AN8327 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=AN8327 PE=1 SV=1
5.42e-191 10 382 9 378
Probable endopolygalacturonase AFUB_016610 OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=AFUB_016610 PE=3 SV=1
5.42e-191 10 382 9 378
Probable endopolygalacturonase AFUA_1G17220 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=AFUA_1G17220 PE=3 SV=1
5.97e-188 10 382 9 378
Probable endopolygalacturonase NFIA_008150 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=NFIA_008150 PE=3 SV=1
7.38e-158 20 382 19 378
Probable endopolygalacturonase E OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaE PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000236 0.999731 CS pos: 20-21. Pr: 0.9841

TMHMM  Annotations      help

There is no transmembrane helices in TSTA_097140-t26_1-p1.