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CAZyme Information: TSTA_061150-t26_1-p1

You are here: Home > Sequence: TSTA_061150-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Talaromyces stipitatus
Lineage Ascomycota; Eurotiomycetes; ; Trichocomaceae; Talaromyces; Talaromyces stipitatus
CAZyme ID TSTA_061150-t26_1-p1
CAZy Family GH28
CAZyme Description conserved hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
252 EQ962652|CGC10 27406.32 4.9409
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TstipitatusATCC10500 12629 441959 146 12483
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in TSTA_061150-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL7 31 243 2.1e-57 0.985981308411215

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
400923 Alginate_lyase2 9.40e-36 31 243 3 222
Alginate lyase. Alginate lyases are enzymes that degrade the linear polysaccharide alignate. They cleave the glycosidic linkage of alignate through a beta-elimination reaction. This family forms an all beta fold and is different to all alpha fold of pfam05426.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.65e-141 1 243 1 243
3.50e-101 20 244 30 253
4.01e-70 1 243 1 249
7.80e-70 1 243 1 248
5.92e-69 1 243 1 246

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.38e-59 21 244 6 232
Chain A, Glucuronan lyase [Trichoderma parareesei]

Swiss-Prot Hits      help

TSTA_061150-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000390 0.999600 CS pos: 20-21. Pr: 0.9703

TMHMM  Annotations      download full data without filtering help

Start End
7 29