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CAZyme Information: TSTA_058050-t26_1-p1

You are here: Home > Sequence: TSTA_058050-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Talaromyces stipitatus
Lineage Ascomycota; Eurotiomycetes; ; Trichocomaceae; Talaromyces; Talaromyces stipitatus
CAZyme ID TSTA_058050-t26_1-p1
CAZy Family GH18
CAZyme Description GMC type oxidoreductase, putative
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
415 44488.94 5.0768
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TstipitatusATCC10500 12629 441959 146 12483
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.1.3.16:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 131 407 1e-52 0.5721830985915493

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225186 BetA 6.04e-32 132 401 235 528
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000 PRK02106 1.44e-28 133 401 234 526
choline dehydrogenase; Validated
398739 GMC_oxred_C 1.04e-21 284 401 1 142
GMC oxidoreductase. This domain found associated with pfam00732.
215420 PLN02785 3.41e-09 148 202 278 332
Protein HOTHEAD
366272 GMC_oxred_N 1.63e-07 112 174 138 206
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.76e-148 1 412 1 542
1.77e-112 88 410 191 572
8.03e-91 88 410 189 573
1.51e-66 94 404 202 575
2.55e-40 136 406 271 573

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.92e-19 151 403 264 523
Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],2JBV_B Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],4MJW_A Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis],4MJW_B Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis]
4.92e-19 151 403 264 523
Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_B Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_C Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_D Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_E Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_F Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_G Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_H Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis]
6.59e-19 151 403 264 523
Chain A, Choline oxidase [Arthrobacter globiformis],3LJP_B Chain B, Choline oxidase [Arthrobacter globiformis]
7.48e-18 150 403 301 594
Crystal structure of pyranose dehydrogenase from Agaricus meleagris, wildtype [Leucoagaricus meleagris]
1.56e-15 132 407 230 515
3.0 A structure of the Prunus mume hydroxynitrile lyase isozyme-1 [Prunus mume],3RED_B 3.0 A structure of the Prunus mume hydroxynitrile lyase isozyme-1 [Prunus mume],3RED_C 3.0 A structure of the Prunus mume hydroxynitrile lyase isozyme-1 [Prunus mume],3RED_D 3.0 A structure of the Prunus mume hydroxynitrile lyase isozyme-1 [Prunus mume],3RED_E 3.0 A structure of the Prunus mume hydroxynitrile lyase isozyme-1 [Prunus mume],3RED_F 3.0 A structure of the Prunus mume hydroxynitrile lyase isozyme-1 [Prunus mume],3RED_G 3.0 A structure of the Prunus mume hydroxynitrile lyase isozyme-1 [Prunus mume],3RED_H 3.0 A structure of the Prunus mume hydroxynitrile lyase isozyme-1 [Prunus mume],3RED_I 3.0 A structure of the Prunus mume hydroxynitrile lyase isozyme-1 [Prunus mume],3RED_J 3.0 A structure of the Prunus mume hydroxynitrile lyase isozyme-1 [Prunus mume],3RED_K 3.0 A structure of the Prunus mume hydroxynitrile lyase isozyme-1 [Prunus mume],3RED_L 3.0 A structure of the Prunus mume hydroxynitrile lyase isozyme-1 [Prunus mume]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.11e-24 101 403 219 586
Pyranose dehydrogenase OS=Agaricus bisporus OX=5341 GN=pdh1 PE=1 SV=1
1.83e-23 150 408 341 637
Versicolorin B synthase stcN OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=stcN PE=2 SV=1
7.56e-23 131 408 284 609
Oxidoreductase cicC OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=cicC PE=1 SV=1
1.45e-22 120 408 314 641
Versicolorin B synthase OS=Aspergillus parasiticus (strain ATCC 56775 / NRRL 5862 / SRRC 143 / SU-1) OX=1403190 GN=aflK PE=1 SV=1
1.49e-21 129 406 298 624
Patulin synthase OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=patE PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.182547 0.817444 CS pos: 22-23. Pr: 0.7124

TMHMM  Annotations      help

There is no transmembrane helices in TSTA_058050-t26_1-p1.