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CAZyme Information: TSTA_022290-t26_1-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Talaromyces stipitatus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Eurotiomycetes; ; Trichocomaceae; Talaromyces; Talaromyces stipitatus | |||||||||||
| CAZyme ID | TSTA_022290-t26_1-p1 | |||||||||||
| CAZy Family | AA7 | |||||||||||
| CAZyme Description | extracellular rhamnogalacturonase, putative | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.171:11 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 71 | 375 | 2.5e-49 | 0.9476923076923077 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 215426 | PLN02793 | 3.34e-17 | 41 | 378 | 51 | 412 | Probable polygalacturonase |
| 215540 | PLN03010 | 1.31e-15 | 44 | 377 | 48 | 391 | polygalacturonase |
| 178580 | PLN03003 | 5.25e-15 | 44 | 367 | 25 | 364 | Probable polygalacturonase At3g15720 |
| 395231 | Glyco_hydro_28 | 9.20e-15 | 145 | 360 | 81 | 303 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 177865 | PLN02218 | 1.82e-13 | 45 | 360 | 70 | 408 | polygalacturonase ADPG |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.19e-304 | 1 | 445 | 1 | 445 | |
| 4.41e-286 | 1 | 447 | 1 | 439 | |
| 1.33e-224 | 2 | 445 | 4 | 446 | |
| 9.76e-220 | 1 | 445 | 3 | 446 | |
| 9.76e-220 | 1 | 445 | 3 | 446 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5.28e-200 | 28 | 439 | 6 | 416 | Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus] |
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| 2.79e-15 | 39 | 368 | 15 | 368 | Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.65e-199 | 18 | 439 | 18 | 434 | Rhamnogalacturonase A OS=Aspergillus aculeatus OX=5053 GN=rhgA PE=1 SV=1 |
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| 1.09e-192 | 28 | 439 | 27 | 439 | Probable rhamnogalacturonase B OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=rhgB PE=3 SV=1 |
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| 2.12e-191 | 28 | 439 | 27 | 439 | Probable rhamnogalacturonase B OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=rhgB PE=3 SV=1 |
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| 2.52e-191 | 28 | 439 | 26 | 438 | Probable rhamnogalacturonase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=rhgB PE=3 SV=1 |
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| 4.27e-191 | 28 | 439 | 27 | 439 | Probable rhamnogalacturonase B OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=rhgB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000264 | 0.999699 | CS pos: 18-19. Pr: 0.9747 |