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CAZyme Information: TRIVIDRAFT_76590-t45_1-p1

You are here: Home > Sequence: TRIVIDRAFT_76590-t45_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Trichoderma virens
Lineage Ascomycota; Sordariomycetes; ; Hypocreaceae; Trichoderma; Trichoderma virens
CAZyme ID TRIVIDRAFT_76590-t45_1-p1
CAZy Family GT15
CAZyme Description glycoside hydrolase family 27 protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
444 ABDF02000087|CGC4 48170.01 5.1817
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TvirensGv29-8 12405 413071 0 12405
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.22:58 2.4.1.-:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH27 134 418 2.8e-62 0.9912663755458515

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
269893 GH27 1.82e-119 39 340 1 271
glycosyl hydrolase family 27 (GH27). GH27 enzymes occur in eukaryotes, prokaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-N-acetylgalactosaminidase, and 3-alpha-isomalto-dextranase. All GH27 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH27 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively.
166449 PLN02808 1.69e-88 36 430 29 376
alpha-galactosidase
177874 PLN02229 2.59e-87 39 432 63 412
alpha-galactosidase
178295 PLN02692 2.44e-83 36 430 53 401
alpha-galactosidase
374582 Melibiase_2 7.75e-70 39 340 2 284
Alpha galactosidase A.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 444 1 444
0.0 1 444 1 465
6.05e-305 1 444 1 444
7.05e-304 5 444 5 444
1.22e-287 1 441 1 440

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.65e-298 28 444 1 417
Chain A, alpha-galactosidase [Trichoderma reesei],1T0O_A Chain A, alpha-galactosidase [Trichoderma reesei]
2.74e-83 36 431 6 353
Chain A, alpha-galactosidase [Oryza sativa]
1.65e-78 39 423 9 375
Crystal structure of alpha-galactosidase I from Mortierella vinacea [Umbelopsis vinacea]
1.89e-77 36 431 6 354
Nicotiana benthamiana alpha-galactosidase [Nicotiana benthamiana]
1.05e-64 22 382 13 359
Chain A, Alpha-galactosidase 1 [Saccharomyces cerevisiae],3LRL_A Chain A, Alpha-galactosidase 1 [Saccharomyces cerevisiae]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.06e-181 27 441 24 452
Probable alpha-galactosidase B OS=Talaromyces emersonii OX=68825 PE=3 SV=1
7.51e-180 21 441 12 435
Probable alpha-galactosidase B OS=Penicillium simplicissimum OX=69488 GN=agl1 PE=2 SV=1
2.23e-178 21 441 13 442
Probable alpha-galactosidase B OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=aglB PE=3 SV=1
7.85e-178 18 441 14 448
Probable alpha-galactosidase B OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=aglB PE=3 SV=1
9.02e-178 21 441 13 442
Probable alpha-galactosidase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=aglB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000304 0.999697 CS pos: 27-28. Pr: 0.9778

TMHMM  Annotations      help

There is no transmembrane helices in TRIVIDRAFT_76590-t45_1-p1.