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CAZyme Information: TRIVIDRAFT_65505-t45_1-p1

You are here: Home > Sequence: TRIVIDRAFT_65505-t45_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Trichoderma virens
Lineage Ascomycota; Sordariomycetes; ; Hypocreaceae; Trichoderma; Trichoderma virens
CAZyme ID TRIVIDRAFT_65505-t45_1-p1
CAZy Family GH72|CBM43
CAZyme Description glycoside hydrolase family 11 protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
226 ABDF02000090|CGC2 24052.63 5.1056
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TvirensGv29-8 12405 413071 0 12405
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8:12

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH11 57 220 1.4e-56 0.9378531073446328

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395367 Glyco_hydro_11 2.81e-78 50 212 1 166
Glycosyl hydrolases family 11.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.72e-162 1 226 1 226
2.51e-160 1 226 1 226
2.38e-149 1 226 1 226
2.78e-148 1 226 1 226
2.78e-148 1 226 1 226

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.05e-96 49 226 1 178
Chain A, Endo-1,4-beta-xylanase I [Trichoderma reesei]
2.01e-50 61 225 22 189
Chain A, Endo-1,4-beta-xylanase 2 [Trichoderma reesei],4XQ4_A Chain A, Endo-1,4-beta-xylanase 2 [Trichoderma reesei],4XQ4_B Chain B, Endo-1,4-beta-xylanase 2 [Trichoderma reesei],6JXL_A Crystal Structures of Endo-beta-1,4-xylanase II Complexed with Xylotriose [Trichoderma reesei RUT C-30],6K9O_A Crystal Structure Analysis of Protein [Trichoderma reesei RUT C-30],6KWD_A Crystal Structure Analysis of Endo-beta-1,4-Xylanase II Complexed with Xylotriose [Trichoderma reesei RUT C-30]
2.07e-50 53 225 13 190
HIGH-RESOLUTION STRUCTURES OF XYLANASES FROM B. CIRCULANS AND T. HARZIANUM IDENTIFY A NEW FOLDING PATTERN AND IMPLICATIONS FOR THE ATOMIC BASIS OF THE CATALYSIS [Trichoderma harzianum]
2.07e-50 61 225 23 190
Chain A, Endo-1,4-beta-xylanase 2 [Trichoderma reesei RUT C-30],6KW9_A Crystal Structure Analysis of Endo-beta-1,4-xylanase II Complexed with Xylotriose [Trichoderma reesei RUT C-30],6KWF_A Crystal Structure Analysis of Endo-beta-1,4-xylanase II Complexed with Xylotriose [Trichoderma reesei RUT C-30]
5.70e-50 61 225 22 189
Crystal Structures of Endo-beta-1,4-xylanase II Complexed with Xylotriose [Trichoderma reesei RUT C-30],6K9W_A Chain A, Endo-1,4-beta-xylanase 2 [Trichoderma reesei RUT C-30]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.99e-112 1 226 1 229
Endo-1,4-beta-xylanase 1 OS=Hypocrea jecorina (strain ATCC 56765 / BCRC 32924 / NRRL 11460 / Rut C-30) OX=1344414 GN=xyn1 PE=1 SV=1
1.99e-112 1 226 1 229
Endo-1,4-beta-xylanase 1 OS=Hypocrea jecorina (strain QM6a) OX=431241 GN=TRIREDRAFT_74223 PE=1 SV=1
7.20e-69 13 216 2 210
Endo-1,4-beta-xylanase B OS=Talaromyces funiculosus OX=28572 GN=xynB PE=1 SV=1
3.70e-57 1 225 1 222
Endo-1,4-beta-xylanase B OS=Phanerodontia chrysosporium OX=2822231 GN=xynB PE=1 SV=1
4.22e-56 1 224 1 230
Probable endo-1,4-beta-xylanase A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=xlnA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000262 0.999702 CS pos: 19-20. Pr: 0.9719

TMHMM  Annotations      help

There is no transmembrane helices in TRIVIDRAFT_65505-t45_1-p1.