CAZyme Information: TRIVIDRAFT_59409-t45_1-p1

Basic Information

• Species: Trichoderma virens
• Lineage: Ascomycota; Sordariomycetes; ; Hypocreaceae; Trichoderma; Trichoderma virens
• CAZyme ID: TRIVIDRAFT_59409-t45_1-p1
• CAZy Family: GH55
• CAZyme Description: glycoside hydrolase family 11 protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
230		24477.76	4.7584

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_TvirensGv29-8	12405	413071	0	12405

• Gene Location: location=ABDF02000076:116578-117337(+)

Full Sequence      

MVGFTNFVIALTGIAGSFAMPTGLGPSESSVNITERGIYDFVLGPHNNIRRRASINYDQN
YQTGGQVTYSPSGTGFSVNWNTQDDFVVGVGWTVGSSSPINFSGSFGVNSGTGMLSVYGW
STNPLVEYYIMEDNTNYPAQGTVKGTVTSDGATYTIYENTRVNEPSIQGTATFNQYISVR
NSARTSGTVTVQNHFNAWASHGMNLGAMNYQVVAVEGWGGSGSASQSVSN

Enzyme Prediction     

EC	3.2.1.8:12

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH11	58	225	2.8e-62	0.9548022598870056

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
395367	Glyco_hydro_11	5.13e-82	54	225	1	175	Glycosyl hydrolases family 11.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UKZ52348.1|GH11	2.72e-166	1	230	1	230
UKZ78166.1|GH11	2.72e-166	1	230	1	230
QYS99402.1|GH11	3.77e-148	1	230	1	230
AFD50199.1|GH11	5.29e-141	1	230	1	229
ABK59833.1|GH11	7.52e-141	1	230	1	229

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1XYN_A	4.83e-117	53	230	1	178	Chain A, Endo-1,4-beta-xylanase I [Trichoderma reesei]
6QE8_A	2.06e-56	49	230	25	211	Crystal structure of Aspergillus niger GH11 endoxylanase XynA in complex with xylobiose epoxide activity based probe [Aspergillus niger]
1UKR_A	5.08e-56	53	230	2	184	Structure Of Endo-1,4-Beta-Xylanase C [Aspergillus niger],1UKR_B Structure Of Endo-1,4-Beta-Xylanase C [Aspergillus niger],1UKR_C Structure Of Endo-1,4-Beta-Xylanase C [Aspergillus niger],1UKR_D Structure Of Endo-1,4-Beta-Xylanase C [Aspergillus niger]
1BK1_A	7.19e-56	53	230	2	184	Endo-1,4-Beta-Xylanase C [Aspergillus awamori],1T6G_C Chain C, Endo-1,4-beta-xylanase I [Aspergillus niger],1T6G_D Chain D, Endo-1,4-beta-xylanase I [Aspergillus niger]
2QZ2_A	2.04e-55	53	230	2	184	Chain A, Endo-1,4-beta-xylanase I [Aspergillus niger]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|G0R947|XYN1_HYPJQ	1.34e-141	1	230	1	229	Endo-1,4-beta-xylanase 1 OS=Hypocrea jecorina (strain QM6a) OX=431241 GN=TRIREDRAFT_74223 PE=1 SV=1
sp|P36218|XYN1_HYPJR	1.34e-141	1	230	1	229	Endo-1,4-beta-xylanase 1 OS=Hypocrea jecorina (strain ATCC 56765 / BCRC 32924 / NRRL 11460 / Rut C-30) OX=1344414 GN=xyn1 PE=1 SV=1
sp|Q8J0K5|XYNB_TALFU	1.28e-70	50	220	38	210	Endo-1,4-beta-xylanase B OS=Talaromyces funiculosus OX=28572 GN=xynB PE=1 SV=1
sp|Q0CFS3|XYNA_ASPTN	3.74e-58	1	228	1	230	Probable endo-1,4-beta-xylanase A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=xlnA PE=3 SV=1
sp|B5A7N4|XYN2_TRIHA	5.52e-58	1	229	1	221	Endo-1,4-beta-xylanase 2 OS=Trichoderma harzianum OX=5544 GN=Xyn2 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000265	0.999719	CS pos: 19-20. Pr: 0.9810

TMHMM  Annotations     

There is no transmembrane helices in TRIVIDRAFT_59409-t45_1-p1.