CAZyme Information: TRIVIDRAFT_58670-t45_1-p1

Basic Information

• Species: Trichoderma virens
• Lineage: Ascomycota; Sordariomycetes; ; Hypocreaceae; Trichoderma; Trichoderma virens
• CAZyme ID: TRIVIDRAFT_58670-t45_1-p1
• CAZy Family: GH55
• CAZyme Description: glycoside hydrolase family 3 protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
770		84093.88	4.8582

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_TvirensGv29-8	12405	413071	0	12405

• Gene Location: location=ABDF02000080:508293-510898(+)

Full Sequence      

MKSSICICTAALAAVGQATANHPLYKNPHASVDDRVSDLLKRMSVKEKMAQLIQGDMSNY
LDLTYGTFNKTGLEWNMEYRANSVWTGYYTNMTTVKKAAQLAQDYLAKETELGIPAFVQS
EGLHGFLGLNATIFNSPIGMACSFNPELVEEMARAIATESLALGVNQLFAPLADLARELR
YGRVEECFSEDPYLTGEMAYSFAKGLQEKGVSATIKHFAAFASPEQGINTSPVHGGEREL
RSLYLPSFKRAIIDSGATSIMSSYNSYDGVPMVSNSEVLTDILRGEWGYKYFVISDAGGT
ARLANAFYVCEIKDNDCITLEALPAGNDVEMGGGYFSFESIPELIESGKLSENVLDTAVS
RVLRAKFTLGLFEKPFTGVSDKDIFKYINTKEHKQIARQLDSESIVLLENHGNVLPLKKD
ANVAVIGPMAHGYVQYGDYVIHTAMTRGVTPLDGINSVSKGKVTYAKGCERWSNDESGFD
EAIAAAEASDVAIVVVGTWSRDQNELWSGFNATTGEHIDVSNLNLVGAMPRLVKAITETG
KPTIVVYSSGKPITEPWISEEASALVQQFYQSEQGGYALADVLYGNVNPSGKLSVSFPYD
VGTLPIYYDYLNSARSYPNPGHVYDNGTIVFGSTYVLENPTALYEFGYGLSYSQFKFSDI
SVSKSRVSASDTVTVSVKVTNTSQRDGAEVVQLYVKDVLASVDVPRYQLKGFKKVTVKAG
KSTTVKIDLAVEDWGLWNRKMQYVVEPGEFTVLVGNSSENFQGNVTVTVS

Enzyme Prediction     

EC	3.2.1.120:1	3.2.1.21:1

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	107	331	3.5e-66	0.9861111111111112

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
185053	PRK15098	2.04e-167	1	762	1	758	beta-glucosidase BglX.
224389	BglX	2.36e-87	43	431	1	365	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
178629	PLN03080	1.39e-75	92	727	60	740	Probable beta-xylosidase; Provisional
395747	Glyco_hydro_3	3.91e-64	44	365	1	316	Glycosyl hydrolase family 3 N terminal domain.
396478	Glyco_hydro_3_C	3.22e-57	405	652	1	216	Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UKZ47045.1|GH3	0.0	1	770	1	770
QYS93870.1|GH3	0.0	1	770	1	770
UKZ73619.1|GH3	0.0	1	770	1	757
UKZ59987.1|GH3	0.0	12	770	2	760
UKZ85336.1|GH3	0.0	1	770	1	771

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5YOT_A	5.16e-319	23	769	5	756	Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YOT_B Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YQS_A Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YQS_B Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40]
7EAP_A	3.61e-318	23	769	5	756	Chain A, Fn3_like domain-containing protein [Aspergillus oryzae RIB40]
5TF0_A	2.27e-115	34	760	10	742	Crystal Structure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393],5TF0_B Crystal Structure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393]
5XXL_A	2.85e-115	26	760	5	743	Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXL_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXM_A Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482],5XXM_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482]
5XXN_A	1.54e-114	26	760	5	743	Crystal Structure of mutant (D286N) beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorose [Bacteroides thetaiotaomicron VPI-5482],5XXN_B Crystal Structure of mutant (D286N) beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorose [Bacteroides thetaiotaomicron VPI-5482],5XXO_A Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose [Bacteroides thetaiotaomicron VPI-5482],5XXO_B Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q56078|BGLX_SALTY	1.59e-120	21	758	26	754	Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
sp|P33363|BGLX_ECOLI	6.14e-120	21	758	26	754	Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
sp|T2KMH0|PLH24_FORAG	2.35e-118	90	759	42	711	Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
sp|T2KMH9|PLH34_FORAG	2.06e-98	25	762	29	748	Putative beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22230 PE=2 SV=1
sp|P14002|BGLB_ACET2	4.30e-95	112	770	35	669	Thermostable beta-glucosidase B OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=bglB PE=1 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000216	0.999739	CS pos: 20-21. Pr: 0.9660

TMHMM  Annotations     

There is no transmembrane helices in TRIVIDRAFT_58670-t45_1-p1.