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CAZyme Information: TRIVIDRAFT_58256-t45_1-p1

You are here: Home > Sequence: TRIVIDRAFT_58256-t45_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Trichoderma virens
Lineage Ascomycota; Sordariomycetes; ; Hypocreaceae; Trichoderma; Trichoderma virens
CAZyme ID TRIVIDRAFT_58256-t45_1-p1
CAZy Family GH5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
254 ABDF02000083|CGC5 28218.55 5.5737
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TvirensGv29-8 12405 413071 0 12405
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in TRIVIDRAFT_58256-t45_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH128 25 246 5.8e-49 0.96875

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
371727 Glyco_hydro_cc 3.40e-45 27 246 17 235
Glycosyl hydrolase catalytic core. This family is probably a glycosyl hydrolase, and is conserved in fungi and some Proteobacteria. The pombe member is annotated as being from IPR013781.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
8.58e-197 1 254 17 270
8.15e-186 1 254 17 270
2.77e-182 1 240 1 240
9.82e-181 1 254 1 254
1.40e-180 1 254 1 254

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.72e-181 1 254 23 276
Chain A, Glyco_hydro_cc domain-containing protein [Trichoderma gamsii]
2.59e-82 7 254 198 444
Chain A, Glyco_hydro_cc domain-containing protein [Cryptococcus neoformans]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.16e-14 62 248 343 530
Alkali-sensitive linkage protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=asl1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000052 0.000004

TMHMM  Annotations      help

There is no transmembrane helices in TRIVIDRAFT_58256-t45_1-p1.