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CAZyme Information: TRIVIDRAFT_56652-t45_1-p1

You are here: Home > Sequence: TRIVIDRAFT_56652-t45_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Trichoderma virens
Lineage Ascomycota; Sordariomycetes; ; Hypocreaceae; Trichoderma; Trichoderma virens
CAZyme ID TRIVIDRAFT_56652-t45_1-p1
CAZy Family GH5
CAZyme Description glycoside hydrolase family 10 protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
323 35016.39 7.8156
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TvirensGv29-8 12405 413071 0 12405
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8:45

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 28 321 1.5e-103 0.9933993399339934

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395262 Glyco_hydro_10 1.83e-145 29 321 1 310
Glycosyl hydrolase family 10.
214750 Glyco_10 3.36e-125 72 319 1 263
Glycosyl hydrolase family 10.
226217 XynA 5.22e-83 63 323 58 341
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.20e-236 1 323 1 323
4.15e-228 1 323 1 323
5.79e-224 1 306 1 306
1.49e-221 1 323 1 323
1.17e-218 1 322 1 322

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.88e-146 26 323 3 302
XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH 1,2-(4-DEOXY-BETA-L-THREO-HEX-4-ENOPYRANOSYLURONIC ACID)-BETA-1,4-XYLOTRIOSE) [Penicillium simplicissimum],1B31_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, NATIVE WITH PEG200 AS CRYOPROTECTANT [Penicillium simplicissimum],1B3V_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH XYLOSE [Penicillium simplicissimum],1B3W_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH XYLOBIOSE [Penicillium simplicissimum],1B3X_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH XYLOTRIOSE [Penicillium simplicissimum],1B3Y_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH XYLOTETRAOSE [Penicillium simplicissimum],1B3Z_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH XYLOPENTAOSE [Penicillium simplicissimum],1BG4_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM [Penicillium simplicissimum]
7.52e-139 26 323 3 302
Crystal structure of an endo-beta-1,4-xylanase (glycoside hydrolase family 10/GH10) enzyme from Aspergillus niger [Aspergillus niger CBS 513.88],4XUY_B Crystal structure of an endo-beta-1,4-xylanase (glycoside hydrolase family 10/GH10) enzyme from Aspergillus niger [Aspergillus niger CBS 513.88]
3.16e-138 28 323 5 301
0.89A Ultra high resolution structure of a Thermostable Xylanase from Thermoascus Aurantiacus [Thermoascus aurantiacus],1I1X_A 1.11 A ATOMIC RESOLUTION STRUCTURE OF A THERMOSTABLE XYLANASE FROM THERMOASCUS AURANTIACUS [Thermoascus aurantiacus]
3.66e-137 28 323 5 301
The xylanase TA from Thermoascus aurantiacus utilizes arabinose decorations of xylan as significant substrate specificity determinants. [Thermoascus aurantiacus]
6.01e-136 28 323 5 301
Thermostable xylanase I from Thermoascus aurantiacus- Crystal form II [Thermoascus aurantiacus],1GOM_A Thermostable xylanase I from Thermoascus aurantiacus- Crystal form I [Thermoascus aurantiacus],1GOO_A Thermostable xylanase I from Thermoascus aurantiacus - Cryocooled glycerol complex [Thermoascus aurantiacus],1GOQ_A Thermostable xylanase I from Thermoascus aurantiacus - Room temperature xylobiose complex [Thermoascus aurantiacus],1GOR_A THERMOSTABLE XYLANASE I FROM THERMOASCUS AURANTIACUS - XYLOBIOSE COMPLEX AT 100 K [Thermoascus aurantiacus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.17e-150 4 323 5 326
Probable endo-1,4-beta-xylanase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=xlnC PE=2 SV=2
2.17e-150 4 323 5 326
Probable endo-1,4-beta-xylanase C OS=Aspergillus terreus OX=33178 GN=xlnC PE=2 SV=1
6.95e-149 6 323 7 325
Endo-1,4-beta-xylanase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=xlnC PE=2 SV=2
4.29e-148 14 323 15 327
Endo-1,4-beta-xylanase A OS=Penicillium canescens OX=5083 GN=xylA PE=1 SV=1
4.61e-148 14 323 15 329
Endo-1,4-beta-xylanase A OS=Talaromyces purpureogenus OX=1266744 GN=XynA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000228 0.999759 CS pos: 24-25. Pr: 0.9254

TMHMM  Annotations      help

There is no transmembrane helices in TRIVIDRAFT_56652-t45_1-p1.