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CAZyme Information: TRIVIDRAFT_54537-t45_1-p1

You are here: Home > Sequence: TRIVIDRAFT_54537-t45_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Trichoderma virens
Lineage Ascomycota; Sordariomycetes; ; Hypocreaceae; Trichoderma; Trichoderma virens
CAZyme ID TRIVIDRAFT_54537-t45_1-p1
CAZy Family GH47
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
733 ABDF02000004|CGC13 79710.16 5.7659
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TvirensGv29-8 12405 413071 0 12405
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in TRIVIDRAFT_54537-t45_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 213 475 2.2e-54 0.48905109489051096
AA3 475 726 1.7e-28 0.4306569343065693

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
366272 GMC_oxred_N 8.86e-59 268 487 4 218
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
225186 BetA 6.59e-41 219 727 9 535
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
398739 GMC_oxred_C 8.40e-27 566 722 1 140
GMC oxidoreductase. This domain found associated with pfam00732.
235000 PRK02106 2.10e-11 412 728 223 533
choline dehydrogenase; Validated
224154 COG1233 8.24e-10 217 436 3 271
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
7.18e-202 5 733 7 734
8.65e-16 217 723 250 777
1.86e-15 219 723 259 783
1.66e-13 217 729 268 798
2.66e-13 217 723 253 780

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.68e-11 216 723 228 757
Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A],4QI7_B Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A]
7.94e-10 216 729 6 542
Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides],4QI5_A Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]
9.59e-10 216 729 228 764
Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]
4.73e-08 219 723 4 528
Chain A, Cellobiose dehydrogenase [Phanerodontia chrysosporium],1NAA_B Chain B, Cellobiose dehydrogenase [Phanerodontia chrysosporium]
4.76e-08 219 723 9 533
Chain A, cellobiose dehydrogenase [Phanerodontia chrysosporium],1KDG_B Chain B, cellobiose dehydrogenase [Phanerodontia chrysosporium]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.87e-89 103 733 86 746
Long-chain-alcohol oxidase FAO2 OS=Lotus japonicus OX=34305 GN=FAO2 PE=2 SV=1
1.00e-84 94 733 65 742
Long-chain-alcohol oxidase FAO4B OS=Arabidopsis thaliana OX=3702 GN=FAO4B PE=2 SV=2
3.63e-81 212 733 227 740
Long-chain-alcohol oxidase FAO3 OS=Arabidopsis thaliana OX=3702 GN=FAO3 PE=1 SV=1
7.35e-79 205 729 224 740
Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus OX=34305 GN=FAO1 PE=1 SV=1
4.56e-76 211 729 217 718
Long-chain-alcohol oxidase FAO4A OS=Arabidopsis thaliana OX=3702 GN=FAO4A PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000054 0.000001

TMHMM  Annotations      help

There is no transmembrane helices in TRIVIDRAFT_54537-t45_1-p1.