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CAZyme Information: TRIVIDRAFT_51554-t45_1-p1

You are here: Home > Sequence: TRIVIDRAFT_51554-t45_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Trichoderma virens
Lineage Ascomycota; Sordariomycetes; ; Hypocreaceae; Trichoderma; Trichoderma virens
CAZyme ID TRIVIDRAFT_51554-t45_1-p1
CAZy Family GH3
CAZyme Description glycoside hydrolase family 5 protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
478 ABDF02000075|CGC2 52165.76 6.6052
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TvirensGv29-8 12405 413071 0 12405
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.164:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 25 470 1.7e-139 0.9956140350877193

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
405300 Glyco_hydr_30_2 1.29e-13 23 252 3 224
O-Glycosyl hydrolase family 30.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 478 1 478
0.0 1 478 1 478
0.0 1 478 1 478
2.52e-303 1 478 1 479
3.05e-290 1 478 1 478

PDB Hits      help

TRIVIDRAFT_51554-t45_1-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.48e-304 1 478 1 479
Endo-beta-1,6-galactanase OS=Hypocrea rufa OX=5547 GN=6GAL PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000239 0.999725 CS pos: 20-21. Pr: 0.9775

TMHMM  Annotations      help

There is no transmembrane helices in TRIVIDRAFT_51554-t45_1-p1.