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CAZyme Information: TRIVIDRAFT_51209-t45_1-p1

You are here: Home > Sequence: TRIVIDRAFT_51209-t45_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Trichoderma virens
Lineage Ascomycota; Sordariomycetes; ; Hypocreaceae; Trichoderma; Trichoderma virens
CAZyme ID TRIVIDRAFT_51209-t45_1-p1
CAZy Family GH3
CAZyme Description glycoside hydrolase family 39 protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
454 ABDF02000076|CGC2 50383.27 5.0734
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TvirensGv29-8 12405 413071 0 12405
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in TRIVIDRAFT_51209-t45_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 135 287 1.7e-18 0.3874709976798144

CDD Domains      help

TRIVIDRAFT_51209-t45_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 454 1 454
2.39e-310 35 454 1 420
2.95e-273 96 454 1 359
4.95e-140 12 450 11 460
4.95e-140 12 450 11 460

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.08e-16 119 352 96 320
Structure of N2152 from Neocallimastix frontalis [Neocallimastix frontalis]

Swiss-Prot Hits      help

TRIVIDRAFT_51209-t45_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000376 0.999590 CS pos: 23-24. Pr: 0.9317

TMHMM  Annotations      help

There is no transmembrane helices in TRIVIDRAFT_51209-t45_1-p1.