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CAZyme Information: TRIVIDRAFT_41607-t45_1-p1

You are here: Home > Sequence: TRIVIDRAFT_41607-t45_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Trichoderma virens
Lineage Ascomycota; Sordariomycetes; ; Hypocreaceae; Trichoderma; Trichoderma virens
CAZyme ID TRIVIDRAFT_41607-t45_1-p1
CAZy Family GH18
CAZyme Description glycoside hydrolase family 27 protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
496 ABDF02000089|CGC13 54948.81 5.3499
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TvirensGv29-8 12405 413071 0 12405
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.22:15

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH27 122 399 8.1e-68 0.9694323144104804

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
269893 GH27 2.04e-124 27 316 1 271
glycosyl hydrolase family 27 (GH27). GH27 enzymes occur in eukaryotes, prokaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-N-acetylgalactosaminidase, and 3-alpha-isomalto-dextranase. All GH27 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH27 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively.
177874 PLN02229 2.64e-111 19 397 55 390
alpha-galactosidase
166449 PLN02808 4.39e-106 1 392 1 358
alpha-galactosidase
178295 PLN02692 4.46e-101 21 359 50 352
alpha-galactosidase
374582 Melibiase_2 2.48e-79 26 316 1 284
Alpha galactosidase A.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 496 1 496
0.0 1 496 1 496
0.0 1 496 1 496
0.0 1 496 1 496
0.0 1 496 1 496

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.31e-159 21 484 24 474
Chain A, Alpha-galactosidase 1 [Saccharomyces cerevisiae],3LRL_A Chain A, Alpha-galactosidase 1 [Saccharomyces cerevisiae]
1.02e-157 21 484 24 474
Chain A, Alpha-galactosidase 1 [Saccharomyces cerevisiae],3LRM_B Chain B, Alpha-galactosidase 1 [Saccharomyces cerevisiae],3LRM_C Chain C, Alpha-galactosidase 1 [Saccharomyces cerevisiae],3LRM_D Chain D, Alpha-galactosidase 1 [Saccharomyces cerevisiae]
6.16e-128 20 397 2 364
Crystal structure of alpha-galactosidase I from Mortierella vinacea [Umbelopsis vinacea]
1.39e-97 20 412 2 349
Chain A, alpha-galactosidase [Oryza sativa]
3.49e-89 19 405 1 347
Nicotiana benthamiana alpha-galactosidase [Nicotiana benthamiana]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.61e-166 12 478 15 468
Alpha-galactosidase OS=Zygotorulaspora mrakii OX=42260 GN=MEL PE=3 SV=1
1.91e-165 21 478 24 468
Alpha-galactosidase OS=Saccharomyces mikatae OX=114525 GN=MEL PE=3 SV=1
1.34e-162 21 478 23 467
Alpha-galactosidase OS=Lachancea cidri OX=29831 GN=MEL PE=3 SV=1
3.31e-161 21 478 24 468
Alpha-galactosidase 6 OS=Saccharomyces cerevisiae OX=4932 GN=MEL6 PE=3 SV=1
6.64e-161 21 478 24 468
Alpha-galactosidase OS=Saccharomyces pastorianus (strain ATCC 76529 / Carlsberg bottom yeast no.1 / CBS 1513 / CLIB 176 / NBRC 1167 / NCYC 396 / NRRL Y-12693) OX=1073566 GN=MEL PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000309 0.999653 CS pos: 18-19. Pr: 0.9590

TMHMM  Annotations      help

There is no transmembrane helices in TRIVIDRAFT_41607-t45_1-p1.