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CAZyme Information: TRIVIDRAFT_29366-t45_1-p1

You are here: Home > Sequence: TRIVIDRAFT_29366-t45_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Trichoderma virens
Lineage Ascomycota; Sordariomycetes; ; Hypocreaceae; Trichoderma; Trichoderma virens
CAZyme ID TRIVIDRAFT_29366-t45_1-p1
CAZy Family GH13
CAZyme Description glycoside hydrolase family 3 protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
795 86547.02 5.2069
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TvirensGv29-8 12405 413071 0 12405
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.37:31 3.2.1.8:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 96 344 5.9e-53 0.9768518518518519

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178629 PLN03080 6.67e-168 63 771 43 779
Probable beta-xylosidase; Provisional
185053 PRK15098 2.42e-46 130 773 118 764
beta-glucosidase BglX.
224389 BglX 4.30e-46 67 474 23 397
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
396478 Glyco_hydro_3_C 7.71e-44 414 640 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
395747 Glyco_hydro_3 1.14e-20 109 373 73 313
Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 795 1 785
0.0 1 795 1 773
0.0 1 795 1 795
0.0 1 795 1 795
0.0 1 795 1 795

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
0.0 23 786 3 764
GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7I_B GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7J_A Chain A, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4],6Q7J_B Chain B, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4]
0.0 22 786 2 766
Chain A, BETA-XYLOSIDASE [Trichoderma reesei],5A7M_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
0.0 22 787 2 767
Chain A, BETA-XYLOSIDASE [Trichoderma reesei],5AE6_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
1.08e-278 48 784 1 740
Chain A, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
3.08e-278 48 784 1 740
Chain A, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
0.0 10 790 7 801
Probable exo-1,4-beta-xylosidase xlnD OS=Aspergillus aculeatus OX=5053 GN=xlnD PE=3 SV=1
0.0 5 793 5 792
Probable exo-1,4-beta-xylosidase xlnD OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=xlnD PE=3 SV=2
0.0 5 784 10 801
Exo-1,4-beta-xylosidase xlnD OS=Aspergillus niger OX=5061 GN=xlnD PE=1 SV=2
0.0 5 790 5 795
Exo-1,4-beta-xylosidase xlnD OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=xlnD PE=1 SV=1
0.0 5 790 5 794
Probable exo-1,4-beta-xylosidase xlnD OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=xlnD PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000211 0.999754 CS pos: 20-21. Pr: 0.9788

TMHMM  Annotations      help

There is no transmembrane helices in TRIVIDRAFT_29366-t45_1-p1.