CAZyme Information: TRIVIDRAFT_28471-t45_1-p1

Basic Information

• Species: Trichoderma virens
• Lineage: Ascomycota; Sordariomycetes; ; Hypocreaceae; Trichoderma; Trichoderma virens
• CAZyme ID: TRIVIDRAFT_28471-t45_1-p1
• CAZy Family: GH128
• CAZyme Description: glycoside hydrolase family 76 protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
410	ABDF02000006|CGC7	43971.98	5.5632

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_TvirensGv29-8	12405	413071	0	12405

• Gene Location: location=ABDF02000006:374288-375520(+)

Full Sequence      

MALPSWIWKHALAYSAVLSSLLNPTHAAPSTSLSATNYVANSVTAIRQLNNAFYDVETGL
WGSAWWNSANAFTTLADFAQLRLNEANQLNLGGFLRNTYTQAQIASVSVAKFVNSAGLPQ
TLHCINGRGCSASFAASLPTTLQRRGFADFLDDFYDDEGWWALALIHAHDATGDQDYLDS
AIEIFNDMQTGQGTPCGGGIYWSKDRTYVNAIANELYLSVAASLANRVPSNGTYLKIAKA
QWQWFKQSGMINANHLINDGLDSNCKNNGLTTWSYNQGVILGGLSELARATGDGSLLTTA
SAIANAAINALSNSNGILVEADKCELNPGNCGTDGQQFKGAFIRNLRYLNDMAPSANFKN
FILRNAQSIWNNDRNSDNLLGVAWTGPYVAATGSAHSSALDALVAAIAVS

Enzyme Prediction     

No EC number prediction in TRIVIDRAFT_28471-t45_1-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH76	34	403	2.1e-88	0.9134078212290503

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
397638	Glyco_hydro_76	5.66e-30	152	385	83	331	Glycosyl hydrolase family 76. Family of alpha-1,6-mannanases.
227170	COG4833	6.04e-17	153	410	90	350	Predicted alpha-1,6-mannanase, GH76 family [Carbohydrate transport and metabolism].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UKZ47270.1|GH76	6.90e-297	1	410	174	583
UKZ73841.1|GH76	6.90e-297	1	410	174	583
QYS93640.1|GH76	1.56e-279	1	410	174	583
UKZ85124.1|GH76	4.69e-252	1	410	193	599
UKZ60243.1|GH76	7.91e-252	1	410	189	594

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3K7X_A	3.22e-14	143	384	79	314	Chain A, Lin0763 protein [Listeria innocua]
6SHD_A	2.44e-10	137	384	116	363	Structure of the GH76A alpha-1,6-mannanase from Salegentibacter sp. HEL1_6 [Salegentibacter sp. Hel_I_6],6SHD_B Structure of the GH76A alpha-1,6-mannanase from Salegentibacter sp. HEL1_6 [Salegentibacter sp. Hel_I_6],6SHD_C Structure of the GH76A alpha-1,6-mannanase from Salegentibacter sp. HEL1_6 [Salegentibacter sp. Hel_I_6]
6Y8F_A	4.28e-09	137	384	117	364	Chain A, Alpha-1,6-endo-mannanase GH76A mutant [Salegentibacter sp. Hel_I_6]
6SHM_A	7.58e-09	160	384	140	364	An inactive (D136A and D137A) variant of alpha-1,6-mannanase, GH76A of Salegentibacter sp. HEL1_6 in complex with alpha-1,6-mannotetrose [Salegentibacter sp. Hel_I_6]
4MU9_A	9.11e-08	154	386	116	340	Crystal structure of a putative glycosylhydrolase (BT_3782) from Bacteroides thetaiotaomicron VPI-5482 at 1.89 A resolution [Bacteroides thetaiotaomicron VPI-5482],4MU9_B Crystal structure of a putative glycosylhydrolase (BT_3782) from Bacteroides thetaiotaomicron VPI-5482 at 1.89 A resolution [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q05031|DFG5_YEAST	2.03e-15	156	354	122	333	Mannan endo-1,6-alpha-mannosidase DFG5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DFG5 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000278	0.999735	CS pos: 27-28. Pr: 0.9765

TMHMM  Annotations     

There is no transmembrane helices in TRIVIDRAFT_28471-t45_1-p1.