logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: TRIVIDRAFT_216443-t45_1-p1

You are here: Home > Sequence: TRIVIDRAFT_216443-t45_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Trichoderma virens
Lineage Ascomycota; Sordariomycetes; ; Hypocreaceae; Trichoderma; Trichoderma virens
CAZyme ID TRIVIDRAFT_216443-t45_1-p1
CAZy Family GH105
CAZyme Description glycoside hydrolase family 12 protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
328 ABDF02000081|CGC5 35226.75 4.4790
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TvirensGv29-8 12405 413071 0 12405
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.4:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH12 177 319 1.6e-24 0.8653846153846154

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
396303 Glyco_hydro_12 9.40e-15 80 321 3 207
Glycosyl hydrolase family 12.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.30e-232 1 328 1 328
3.30e-232 1 328 1 328
3.74e-218 1 328 1 330
1.26e-190 1 325 1 327
1.26e-190 1 325 1 327

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.67e-11 80 321 19 222
Crystal structure of xeg-edgp [Aspergillus aculeatus],3VLB_D Crystal structure of xeg-edgp [Aspergillus aculeatus]
6.21e-11 80 321 26 229
Crystal structure of XEG [Aspergillus aculeatus],3VL9_A Crystal structure of xeg-xyloglucan [Aspergillus aculeatus],3VL9_B Crystal structure of xeg-xyloglucan [Aspergillus aculeatus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.24e-13 90 320 45 240
Probable xyloglucan-specific endo-beta-1,4-glucanase A OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=xgeA PE=3 SV=1
1.74e-11 80 321 36 241
Xyloglucan-specific endo-beta-1,4-glucanase A OS=Aspergillus niger OX=5061 GN=xgeA PE=1 SV=1
1.74e-11 80 321 36 241
Probable xyloglucan-specific endo-beta-1,4-glucanase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=xgeA PE=3 SV=1
1.65e-10 80 318 45 249
Probable xyloglucan-specific endo-beta-1,4-glucanase A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=xgeA PE=3 SV=2
3.57e-10 80 321 35 238
Xyloglucan-specific endo-beta-1,4-glucanase A OS=Aspergillus aculeatus OX=5053 GN=xgeA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.712515 0.287496

TMHMM  Annotations      download full data without filtering help

Start End
5 27