CAZyme Information: TRIVIDRAFT_201309-t45_1-p1

Basic Information

• Species: Trichoderma virens
• Lineage: Ascomycota; Sordariomycetes; ; Hypocreaceae; Trichoderma; Trichoderma virens
• CAZyme ID: TRIVIDRAFT_201309-t45_1-p1
• CAZy Family: CE4
• CAZyme Description: glycoside hydrolase family 3 protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
839		91892.63	6.3519

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_TvirensGv29-8	12405	413071	0	12405

• Gene Location: location=ABDF02000006:3080207-3082884(+)

Full Sequence      

MGEWQQQTKLGFDVETVLAQLTQNEKIALLSGIDFWHTYPIPEHNVPSVRLTDGPNGIRG
TKFFAGVPAACLPCGTALASTWDKQLLRRAGKLLGDECIAKGAHVWLGPTINTPRSPLGG
RGFESFSEDPYLSGILAASMILGCESTGVISAVKHFVGNDQEHERRAVDCLITPRALREV
YLRPFQIVARDAKPGALMTSYNKVNGKHVADSAEMLEGLLRQEWNWDPLIVSDWYGTYTT
IDAINAGLDLEMPGVSRYRGKYIESALQARLLKQSTLDERARRVLKLAQRAGQLKVSEVE
RGRDFPEDRALNRQICSSSIVLLKNDDSFLPLPKTNAKIALIGSHVRLPAISGGGSASLL
PYYTVSLYDAISEALPGASITHEVGAYAHQMLPVIAAMLDKAVIHFYNDPITVTDRKLLG
SENVSSTSFQLMDYNGVPNLNKAMFWGTLLGDFVPTETGTWEFGLSVFGTANLYIDDELL
IDNTTHQTRGTAFFGKGTTEKIGTKEMVAGRTYKLRLEFGSANTTKMETTGVVNFGGGAV
HLGACVKINPQEMIARAVKAAADADYTIICTGLSGEWESEGFDRQHMDLPPGVDKMISQV
LDAAPNAVVVNQSGTPVTMKWAHKAKAIVQAWYGGNETGHGIADVLFGDVNPSGKLSLSW
PIDVKHNPAYLNYASVGGRVLYGEDVYVGYKFYEKTEREVLFPFGHGLSYATFALSDPVV
KTVPETFRPNQPTVAIVRIKNTSKVAGAQVLQLYISAPNSPTHRPAKELQGFEKVHLEAG
EEKEVHIPIDQYATSFWDEIENKFKSEEGTYEVLVGVSSQEILGKGKLVVPETRYWLGL

Enzyme Prediction     

EC	3.2.1.21:3

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	42	253	5.1e-60	0.9768518518518519

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
185053	PRK15098	7.67e-79	73	822	121	757	beta-glucosidase BglX.
224389	BglX	4.29e-65	34	346	48	364	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
396478	Glyco_hydro_3_C	1.19e-53	320	710	1	216	Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
395747	Glyco_hydro_3	3.54e-37	72	287	88	316	Glycosyl hydrolase family 3 N terminal domain.
405066	Fn3-like	6.21e-27	750	819	2	71	Fibronectin type III-like domain. This domain has a fibronectin type III-like structure. It is often found in association with pfam00933 and pfam01915. Its function is unknown.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UKZ48104.1|GH3	0.0	1	839	1	839
UKZ74652.1|GH3	0.0	1	839	1	819
QYS92715.1|GH3	0.0	1	839	1	839
BAP59014.1|GH3	0.0	10	839	2	831
UKZ84262.1|GH3	0.0	1	839	1	839

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3AC0_A	8.04e-243	12	839	4	845	Crystal structure of Beta-glucosidase from Kluyveromyces marxianus in complex with glucose [Kluyveromyces marxianus],3AC0_B Crystal structure of Beta-glucosidase from Kluyveromyces marxianus in complex with glucose [Kluyveromyces marxianus],3AC0_C Crystal structure of Beta-glucosidase from Kluyveromyces marxianus in complex with glucose [Kluyveromyces marxianus],3AC0_D Crystal structure of Beta-glucosidase from Kluyveromyces marxianus in complex with glucose [Kluyveromyces marxianus]
3ABZ_A	1.33e-238	12	839	4	845	Crystal structure of Se-Met labeled Beta-glucosidase from Kluyveromyces marxianus [Kluyveromyces marxianus],3ABZ_B Crystal structure of Se-Met labeled Beta-glucosidase from Kluyveromyces marxianus [Kluyveromyces marxianus],3ABZ_C Crystal structure of Se-Met labeled Beta-glucosidase from Kluyveromyces marxianus [Kluyveromyces marxianus],3ABZ_D Crystal structure of Se-Met labeled Beta-glucosidase from Kluyveromyces marxianus [Kluyveromyces marxianus]
7MS2_A	1.33e-144	10	833	1	671	Chain A, Thermostable beta-glucosidase B [Acetivibrio thermocellus AD2],7MS2_B Chain B, Thermostable beta-glucosidase B [Acetivibrio thermocellus AD2]
5WAB_A	2.13e-111	21	822	12	655	Crystal Structure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703],5WAB_B Crystal Structure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703],5WAB_C Crystal Structure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703],5WAB_D Crystal Structure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703]
4I3G_A	3.61e-98	17	830	57	828	Crystal Structure of DesR, a beta-glucosidase from Streptomyces venezuelae in complex with D-glucose. [Streptomyces venezuelae],4I3G_B Crystal Structure of DesR, a beta-glucosidase from Streptomyces venezuelae in complex with D-glucose. [Streptomyces venezuelae]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q2U9M7|BGLH_ASPOR	0.0	10	839	1	827	Probable beta-glucosidase H OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=bglH PE=3 SV=2
sp|B0XM94|BGLH_ASPFC	0.0	12	839	5	829	Probable beta-glucosidase H OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=bglH PE=3 SV=1
sp|B8NPL7|BGLH_ASPFN	0.0	10	839	1	827	Probable beta-glucosidase H OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=bglH PE=3 SV=1
sp|A1CUR8|BGLH_ASPCL	0.0	12	839	5	829	Probable beta-glucosidase H OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=bglH PE=3 SV=1
sp|Q4WL79|BGLH_ASPFU	0.0	12	839	5	829	Probable beta-glucosidase H OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=bglH PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000021	0.000031

TMHMM  Annotations     

There is no transmembrane helices in TRIVIDRAFT_201309-t45_1-p1.