logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: TRIREDRAFT_66303-t26_1-p1

You are here: Home > Sequence: TRIREDRAFT_66303-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Trichoderma reesei
Lineage Ascomycota; Sordariomycetes; ; Hypocreaceae; Trichoderma; Trichoderma reesei
CAZyme ID TRIREDRAFT_66303-t26_1-p1
CAZy Family GH65
CAZyme Description predicted protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
272 29729.09 4.3094
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TreeseiQM6a 9138 431241 7 9131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in TRIREDRAFT_66303-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH128 44 264 1.2e-46 0.9642857142857143

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
371727 Glyco_hydro_cc 5.72e-43 45 264 17 235
Glycosyl hydrolase catalytic core. This family is probably a glycosyl hydrolase, and is conserved in fungi and some Proteobacteria. The pombe member is annotated as being from IPR013781.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.48e-174 1 272 1 270
1.52e-172 1 272 1 270
4.51e-168 21 272 3 254
2.61e-167 21 272 3 254
1.68e-163 21 272 3 254

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.15e-168 21 272 25 276
Chain A, Glyco_hydro_cc domain-containing protein [Trichoderma gamsii]
1.77e-79 25 272 198 444
Chain A, Glyco_hydro_cc domain-containing protein [Cryptococcus neoformans]
5.98e-09 46 238 56 248
Chain A, Glyco_hydro_cc domain-containing protein [Cryptococcus neoformans]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.56e-13 79 266 342 530
Alkali-sensitive linkage protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=asl1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000694 0.999268 CS pos: 17-18. Pr: 0.9653

TMHMM  Annotations      help

There is no transmembrane helices in TRIREDRAFT_66303-t26_1-p1.